Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50412 |
Symbol | |
ID | 7199168 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011697 |
Strand | - |
Start bp | 292534 |
End bp | 294887 |
Gene Length | 2354 bp |
Protein Length | 647 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185357 |
Protein GI | 219130406 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.692989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAATTTACAG TTATTGCGTT TCTTACAGTT AAGACCCCTA TTGCTGATGC TTTCGTTGCG TACACTCTCG GTGTATTCCT TCCCTGCACT GTCACCGACG AGCTTGCCAT CCAAAACACT CGTGTTGCCT CGTAACAACC ACGCGAAACG GTGGCTCGTG TTGCTCGGGA GGAGAGCCAA AGCATTATTG GTAGTGGTGT GTCGGGGAGT GCTTGACCTG GGAGTCTTCG ATCGCCTCCG TACTCCTCCT CGCACGCACA CCTCTTTGGG AGCGACTCTC TCTCTCTCTC TGTGAAGCTG TAGTGGAGAA ATGCTACCGT CCAATCACAA TCACACGGGG GTACCGGTGG TAGGGACCGG CCCCCCACGG AGGTCATCGT CGGCCAAGCA CAACCTACAC GGCAACGCCA GTCACCATCG CAACGGATCG TCTCTGCTTT CCTCATCCAC CATCCTCCTC GTATTGGCGA CGGCTATTCC TAGTTTCTTT CTAGGCACAC TTACTTGCTT ATTCGCCGGT ATTGATTGTC AACATCAGTC GTCGGCGACT GTGAACCTCC TGGAAGCCTG GCGCAGTGCC GATCGCGAAT CCACAAGCTG CACTGCCAGC AGCATCGAGC GTCAGCTACA GGCACGGATA CAGACACTAC AAGCTCAGTG GGAGGCCGAT CTAGAGACCA AAATACAACA ACGCACTCGG CAAATGGTCA AACCCGACGG CAGCGATACG TCTACGTCGG GGTACCATCG CGATTGGCTC TTCCCCTCGG ACCGGACCGG CCGCTTCGTC ACCGCCTTGG TCCGGACGCC CAAACTCGGC TTGGTCGATA ACCTCGATCT CGGAGTGCCC GTGGACCCAC CCGGCAAGGG CTACGAAGAT GTCCTGCTAC TCTACAGTCG CGAGTCCACC TTGCCACAGC CCGTCCGGGA CGATCCCACC CTGACCTTTA TGGCCAACAC CACCGCCGCA CTCGAGCACT GCGATTTCGT CAACGTCGTA CTTACGGAAC ACAGCGCCGG TCGGAAACAG TGTATCGCCG TCGTGCCGCA GTACGAATCC TACCACTTGC AAAAATGGAT GCGGGCCCAT CCGCAATCGG GAAAATTGGA CACTGCCGTC CCGCTGAGAC TCGTCAGTCG CGGACACGCT GATAACGGCA GACAAAACTT TATACCACCG GCGCTCGATG ACGCCCGACA GGCCTGGGAA GTGCTGAAAC AGTATCTGGA TAGTGTCGAT GCGGTCTTGG AGGAACTGAA ACCGCTACTG GAAAATATTG CGATTGAGAA CACCGTTATC GTCATGGTGG TGAACTTTGG TCAAACCGAG TTACTCATGA ACTTTGTATG CGCCGCCAAA TCCCGATCAT TGGATTTGTC CAACGTCATT GTCTTTACTA CCGATCAAGA GTCGACCGAT CTGGCCACGT CTTTGGGACT GACCGCTTAC TATGACCAAC GGGTACGTGT TTTGCTCACG GGAGGACCGG TTGACGGAGG GTAGGGCGGT GGTTGATACT GATCAAATAA GTCTCACACT CGTTTTTAAA ATATTGATGT AGAACTTTGG AGAAATTCCC TCCGAAGCCG CCCGGCGGTA CGGTGACCGC CGCTTCACCG CCATGATGAT GGCTAAAGTC ATCTGCGTCC AGCTCGTCTC CATGCTCGGT TACGACTTGC TCTTCCAAGA CGTCGACATT GTTTGGTTTT CCAACCCTCT CGAATACTTT GCCCACGCCG ACCCTGGCAT GGATATGTTT TTTCAAGACG ACGGCGCCCA TTCTACTCGC TACGCTCCGT ATTCCGCCAA TTCTGGACTG TACTTTGTCC GCCACAACCG TCGCACCCGA CACTTTCTCA CCAGCCTACT CATGGTGGGC GACCTGATTG TCAAAACTGA TTCGCACCAA CAAGCCCTCG TGGCGACCCT CAACGAACAC GTTTCCTTGT TTGGACTCCG AGTCAAGGTA CTAGCCCGCG AAACGGACGA GTTCCCCGGC GGATACCACT GGAATCAACG CTCGGGCAAG TACATGCGCG CGTTTTACAG CGGCGACGTA CATCCCGTGC TTTTCCACAT GAGTTGGACA TTGAATAAGA AGGACAAACT CCTATACTTG CGTCAAATGG GGGAATGGTA TGTACAAGAA CACTGCGTGG AAAAGAAACG GTCCCAGATT TTGGGTTTAC CCACAGATAC CGACGCGAAC GCTGTGGACA GTTCAACCCT CGATCTGGTC GAGCCGTGCT GCTCCGCCGA GGCTTTGGTA TCGTGTCACT ACCGCGACAA GCCAAGTATC ATTCCGTGCA AGGATAGTCC ACCAATCGAC AAGGGGAAGC CGTCGTTCTG GTAA
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Protein sequence | MLPSNHNHTG VPVVGTGPPR RSSSAKHNLH GNASHHRNGS SLLSSSTILL VLATAIPSFF LGTLTCLFAG IDCQHQSSAT VNLLEAWRSA DRESTSCTAS SIERQLQARI QTLQAQWEAD LETKIQQRTR QMVKPDGSDT STSGYHRDWL FPSDRTGRFV TALVRTPKLG LVDNLDLGVP VDPPGKGYED VLLLYSREST LPQPVRDDPT LTFMANTTAA LEHCDFVNVV LTEHSAGRKQ CIAVVPQYES YHLQKWMRAH PQSGKLDTAV PLRLVSRGHA DNGRQNFIPP ALDDARQAWE VLKQYLDSVD AVLEELKPLL ENIAIENTVI VMVVNFGQTE LLMNFVCAAK SRSLDLSNVI VFTTDQESTD LATSLGLTAY YDQRNFGEIP SEAARRYGDR RFTAMMMAKV ICVQLVSMLG YDLLFQDVDI VWFSNPLEYF AHADPGMDMF FQDDGAHSTR YAPYSANSGL YFVRHNRRTR HFLTSLLMVG DLIVKTDSHQ QALVATLNEH VSLFGLRVKV LARETDEFPG GYHWNQRSGK YMRAFYSGDV HPVLFHMSWT LNKKDKLLYL RQMGEWYVQE HCVEKKRSQI LGLPTDTDAN AVDSSTLDLV EPCCSAEALV SCHYRDKPSI IPCKDSPPID KGKPSFW
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