Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50408 |
Symbol | |
ID | 7199216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011697 |
Strand | - |
Start bp | 277746 |
End bp | 279252 |
Gene Length | 1507 bp |
Protein Length | 391 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185354 |
Protein GI | 219130399 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCACGATCTC GTCATCCAAT ACACATCCAT TCTTCCACCA TACTTCGTCC GCTACGCTAC TCTTTAACAC GCCACCTTTG GGAGCATCTC GTGGAAAGAG ATTTGCCAAT CCTGCGTCTT GCTTGATCTA TGAGATCTGT CCAACGCCAA CGTGCTTTGC TTTCCAAACG ATACCACCCA AGCATATGCA TACCCGCTAG CTACATCAAT GTATTGGAGG ATCGCCCGCA AGTCTATACG TACTGTTAGC TTTGCACAAG CTTGATGAGA ATAAGCATTT CACAGTTAGG GGTAGTACAG CAACAGCAAC AGCAGCAATA CTAGCGGAAC AATGATTCCT TCCGAATCGA CTGTTGCAGT GCCGTCACCC TCTCTCAACG ACTCTCCGCG TCGACGTCTT ACTACCACGC TGCAGATGCA CAGTCGCAAC AACACCACGA CGAACAGTAG TCGGTGTACG GCACAATCTG TCACGCATTC CATACTTGCC GGATACGCTG CTGGGGTGTC CGGAACCTTG GTGGGACATC CTCTGGATTC CGCCAAGGTC TGGTTGCAAA CCCAGAGTTA CCAAGCTACC AGTAATACGC ACGCAAACGG CAACGCTGCG GCTACGGGGA CGTCTCGAGG TACCGCCATC CACGGCAGTC CTCTTCCGCC AAACTCCGCC GCACGCAACA TGAGTACGTT GGCACACATC GGCAACGACA AAACTCGTAT CGCTCCGCTC TTCTCGTGGG CCCGTGTCCG GAGACTGTAC AAGGGAGTTT CCGGTCCGCT CGTCACGGTC GGTCTCGTTC AGTCCGTCAA CTTTGCTACC TACGATGCCA CGCGACGACT ACTTCATCAG CGACAGGAAC AACGAGATTC GATGCCTTTG CTACCTTACC TACACCACGA TCCCATTCCA CATGTTGGGA TCGCCGCCGC CACGGCTGGC GCCGTACTCG CTACCTTTAC ATCTCCCTTG CTCATACTGA AAACACAACA ACAAGTACAT GGAGTGTCGT TCCGTCAAGC CTTTCAACGA TCTTTCTACG TCGCCACAAA CCGCAACGGG GTACAGAAGT TTCAATTGTC CCGCATGTTT GCTGGATTCG GTCCCCACTT ATTGAGTGAA ACACTCGGAC GTGGCGTTTA CTTTTGCTGT TACGAAAGCC TGAAGCGATA CGGAATGCAG CACTGGCAGT CGGAGGACAC GGCCGCGTCG CCTACCATGT TCACCCGCAT GGCGAGTGCC GCCGCCTCGG GCGTTTTTTG TTGGGCTTTT ATCTTCCCAC TCGATATGGT CCGCTGTCGG GTATACGCGC AGGCAAACGT CCGTGACCAA CCAACACTGT CCGCCCTGGA GTGGGCGCAG CGCTTGTATC GCGAACAACA GTCCTGGCGA GCCTTTTATC GAGGATTTTC GGTCACCGTT CTGCGGGCCG GGCCCGTCGC CGCGGCCGTA CTTCCCATTT ACGATTTGAC GTTCGAGGCC TTGGCAAAAC AGTCACTCGC CACGTGA
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Protein sequence | MIPSESTVAV PSPSLNDSPR RRLTTTLQMH SRNNTTTNSS RCTAQSVTHS ILAGYAAGVS GTLVGHPLDS AKVWLQTQSY QATSNTHANG NAAATGTSRG TAIHGSPLPP NSAARNMSTL AHIGNDKTRI APLFSWARVR RLYKGVSGPL VTVGLVQSVN FATYDATRRL LHQRQEQRDS MPLLPYLHHD PIPHVGIAAA TAGAVLATFT SPLLILKTQQ QVHGVSFRQA FQRSFYVATN RNGVQKFQLS RMFAGFGPHL LSETLGRGVY FCCYESLKRY GMQHWQSEDT AASPTMFTRM ASAAASGVFC WAFIFPLDMV RCRVYAQANV RDQPTLSALE WAQRLYREQQ SWRAFYRGFS VTVLRAGPVA AAVLPIYDLT FEALAKQSLA T
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