| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50397 |
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| Symbol | |
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| ID | 7199206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011697 |
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| Strand | + |
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| Start bp | 231791 |
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| End bp | 234555 |
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| Gene Length | 2765 bp |
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| Protein Length | 891 aa |
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| Translation table | |
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| GC content | 59% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185294 |
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| Protein GI | 219130275 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTCGACACAT TCGGTCATCA TTCGTTGGCC GTTTGCCTTT TTTGCCACTT ACAAATTACT
TGAAATACAG CATACGGTTC ACAGCAAGCA TGTCATTGGG GCGACGGGTG GGAGTGGTGT
CGCGCTGTCC CTGTCGCTGC TCGGGCTTTG GCCCTGGTAG GGACGGGAAC CGGCGTTTGC
CACTACTACT GAATCTACCA CTACCATTGC TACTCGTAGT AGCCCTTTGG TTGACCTCCA
TCCATGCCTT TACCCTTTCT TCGTCGACAA ATCGGCACTG GACGGCGGCG GGTCGACCGT
CACTCGTAAC GCTGCCCGGT TCTTCCAGCC TCGCCTCGTC CTCCTCCGAC GCTACGGAAG
AACAACAATC CGGAGTAAAG GCACCACCGG ATACCGTCCC CGACGTTACC GACACTGATA
CGAACGACGG TGACACAGTC GTCGATGCTC GACCGGATCG TGGGACCCTA TCCACACTCC
AATGCGGCAA TCTCGAACTC GGCACGGCCT TGTTCGCCGG CGGTCTCGCC TTTGACGCCT
ACGTCGAACC GCCCAGCAAT TCCTCACGTT GGGAAAAGGG CAGTCAAGGT CTGCGCGTAG
CCTTTTGCAG TGTCGCGTAC ACTCGTCAAC TCTACAAGGG GGTTTTGGAA GTACGCGTAC
GGACCTGTAC CAATCTGCCC CAGGACGAAA GCAACACGGC CGAACGGATG CTATCCGGCA
ACGGCGCCGA CGCCTGCGTG CTCGTCGCGG CACTGGAAGG AGCCTGGAAA CAAGACGTAC
AGCGATTGGA AAAAGAACAG TACCACGAGG GCGTTCTGGA TCTCAGTGGC GCCGCACACG
TCGGACGATC CACCACCGCC TGGGCCAACG TCAACCAGAA ACAGTCCCAA GCCGCGGTGC
GGAAAACCGG TCGAGCCCTC CCGTACCACA TTCCCGGTGG GTGGGGGAAG GGGGGACAAG
CCGTCTGGCC CGAAACGGAA GAACCCTTTT ACCTGTACGT GCAGGATCCC GCCACGGCAC
GGCTCGTCGT CACCATTCTC GACGACGACA AACTCGCCGG CGCAGGGACG CCCATTGGAT
CCACCTATAA ACGACTCGCC GAACTCATCC CCCAAGCCGC GCTGCCGCCG GAAAAACTGC
TCACATCGCT CAAACAGGAA CTCATTGATC AAGTTCAAAA CGGCAATTTG GATTTGTTGG
ACGATGCTTC CAAGATCAAA CTCGGTGCCA AAACCTGGGA CGGGGTTCTG AAAATGACCT
CCAAACCCCG CAAAAAGGAC AAGAACGGTC AAGTTTTGGC GGCCGCCGCC GCGGGTGCCT
ACGTCGCCGG TCCGGTAGGA GCGGCCGCCG GGGCACTCCT CGGCAGTTTC TACGAAGGCA
CACCCCAAGG TAGCGTCCAA CTCCAGGTAC GCTACCTACC CATTCCCCCC AACGTGGCAA
TTTCCCGACA AACGTACGTG GTCAAGGGTG GAATGCCCGG TGTGGATTGG GGTACGCTGT
TGGAACGCTA CAAGGACAAG ACCTTGCGCA ACCCCGACTC TACCTTGAAA CCGATGGAAC
AAAAGATCCT CGGCACCAGC GACTTGGAAC ATTGCTTCTT TATCAATCAC GACAAGACGG
GTGCCACCTG TTCCGTCTAC CGCTCATTGG ATCAGAAACT GATTGTCGTG TCGTTCCGCG
GCACGTGCGC TCCCGTAGAT CTCATTACCG ACGCGAATTT GGTACAAGAA GCCTGGGTTG
AAGGAGACGA CGTGAAGGAT CCGCTCATTC CCAAAGTCCA TCAGGGTTTC CGGTCGTCGT
TGAATTCTAT TTCCCGCCGT CTTAAGGAAT TGCTGTTGGC CACGGTCCAG CCGGGCGACA
ATTTGTCCGA CTACGATATG CTCGTGACGG GACATTCACT CGGGGGTGCC TTGGCGACGC
TGTTCGTGGC CGATTTGGCG CAGTACGGCA TCGACGCCGG TCGTGGATTA CCCCAGCTGG
AGCCCTCGGA GCCTTGGTGG AAGGGTGTGG CCGATACCTT TATGGGACAA CAAGCCCGGG
AAAAGGCTTC CCAGGCGACG GACCCTCCGC GGCCGAAAAT GTTACGCTTG TACAATTTCG
GCAGTCCCCG CGTCGGTAAC GACGCCTTTT CCGATTTGTT TGCCGCCCTC CAGAGCGAAC
AGTACATTGA CCAGGCCTAC CGGATCGTGA ACGGCCAAGA CGTGGTGGCT CGTATGCCGC
GGACTCTGAA CGCCCTCGTG ACGTCGGTCG GGTACGAGCA CTGCGGAACC ACGGTGTTGA
TTGCGCAACC GTCCAACGCG ACCGATACGA ATCCGAATTT GGCGCCACTG GTTTGGGTCG
AAGGCGAATC GGACGACAAT AAGTGTCCGG TCCGGGACGG TGTCGCCTTG ACATCCCCCC
TGGCGGAAGG TTCGTTGCTC TCCGATCTCA TGGAGACGAC CCGAGACCTG CTGGCCGACG
AAACGACGGA CACTAGCGCG TCCGGCGGAA TTTCGGCCGG TTGGTCGGCT TCATGGAACA
AGTGGACGGC TACCGCCACC AAGGTATCGC AACGGTTCCA GTCGTTGACG GCGACGGATG
TGGCGAGCGT GCTGGGTCTG CAACGCGAGT TCACAACACG GGAACTGGAG TTGGTGCAGG
CACTATTGCA GGGCAAGGCA CTGGCACACC ATCTGGAAGA CGAATACTAC GCCGGTATGG
GTCGGGCGAC GGGATTTTTG GCGCGCGTCG GGGAAGACGT GGTGGAGTTT CCGGAAGAGG
CGTGA
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| Protein sequence | MSLGRRVGVV SRCPCRCSGF GPGRDGNRRL PLLLNLPLPL LLVVALWLTS IHAFTLSSST
NRHWTAAGRP SLVTLPGSSS LASSSSDATE EQQSGVKAPP DTVPDVTDTD TNDGDTVVDA
RPDRGTLSTL QCGNLELGTA LFAGGLAFDA YVEPPSNSSR WEKGSQGLRV AFCSVAYTRQ
LYKGVLEVRV RTCTNLPQDE SNTAERMLSG NGADACVLVA ALEGAWKQDV QRLEKEQYHE
GVLDLSGAAH VGRSTTAWAN VNQKQSQAAV RKTGRALPYH IPGGWGKGGQ AVWPETEEPF
YLYVQDPATA RLVVTILDDD KLAGAGTPIG STYKRLAELI PQAALPPEKL LTSLKQELID
QVQNGNLDLL DDASKIKLGA KTWDGVLKMT SKPRKKDKNG QVLAAAAAGA YVAGPVGAAA
GALLGSFYEG TPQGSVQLQV RYLPIPPNVA ISRQTYVVKG GMPGVDWGTL LERYKDKTLR
NPDSTLKPME QKILGTSDLE HCFFINHDKT GATCSVYRSL DQKLIVVSFR GTCAPVDLIT
DANLVQEAWV EGDDVKDPLI PKVHQGFRSS LNSISRRLKE LLLATVQPGD NLSDYDMLVT
GHSLGGALAT LFVADLAQYG IDAGRGLPQL EPSEPWWKGV ADTFMGQQAR EKASQATDPP
RPKMLRLYNF GSPRVGNDAF SDLFAALQSE QYIDQAYRIV NGQDVVARMP RTLNALVTSV
GYEHCGTTVL IAQPSNATDT NPNLAPLVWV EGESDDNKCP VRDGVALTSP LAEGSLLSDL
METTRDLLAD ETTDTSASGG ISAGWSASWN KWTATATKVS QRFQSLTATD VASVLGLQRE
FTTRELELVQ ALLQGKALAH HLEDEYYAGM GRATGFLARV GEDVVEFPEE A
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