Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50390 |
Symbol | |
ID | 7199203 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011697 |
Strand | + |
Start bp | 206026 |
End bp | 208369 |
Gene Length | 2344 bp |
Protein Length | 623 aa |
Translation table | |
GC content | 58% |
IMG OID | |
Product | probable cell surface glycoprotein |
Protein accession | XP_002185292 |
Protein GI | 219130271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0151497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGAAGTTGC AATTTGTAGA CCGCGATAAA AGCCACCATG AAGACTTCGT TTGCCCTCCT TTCTCTCTTC TACCCTTTGC TGGTGCTTGG TATTGCCCAG GCGCAGTCTG CTGTCTCGCA ACAGCCTGAC AAGTTGGTGA GTATAGCTGC CCTGTAGGAA CTCGATCCAA GCCTGGTGTT GTCTCATTGC CTAAACTTTG AAACGAATCA TTAATTATCT TCAGCTTAAC CTCACGTTCC CTCTTGCTTG CGATTTTCAA TAGAACAATG GTGTCCCATC CGTCCTTGAT GTTGCTGGTC GCCGCCTCAA GAAGGGAGGC TCCAGCTATC ATGGTGAAGG CAAAGGCGGC ACAGCTTCGT CCAGCGCGGA CAGCAAGGGC AAGGGCGGCA AAGGTGCTTC CGGCTCTACG AAAAGCACCA AGTCCTCCAA GTCTCGCAAG TCTGCGAAGG ATCCCAAATC AGAAAAGCAC CCCAAAGCCA CCAACGCACC TGCTCCGGTT GGAACTCCCG TAGTCGCCCC TGTTGTGGCC CCCATCCCAT CTCCCGTGGT CGCCCCTGTT GTGGCACCCA TTCCATCTCC TGTTGTCACC CCCGTTATCG CTCCCGTTCC ATCTCCCGTT GTCGCCCCTG TTGTGGCCCC CATTCCGTCT CCTGTTGTCG CTCCCGTCCC GTCTCCCGTG GTTGCCCCGT CCTATCTCCC ACCGTTCCTA CTATGGAGGT TGTGGGTGTG GAATACAACA TCGCGGTGGG AGACACCATG GGGACTGACA TGATGGACCT CCTAACAGAG ATCGAAACGG ATCTGGTTGA TGCCATGGAT ACCTTGGCGC CTGAAATTGT CGCAGAGATT CTTGCCCCCG GTGGACGTTA CTTGAAGGCT AATGTTTTGG CCCTTCGAAA TGAGCGCCGT CTGAATGCTG TAGTGCAGTT GCCGACTGCC ATTGATTCCT TAATGATGAT GGGTACGTGG AGAGTTGGAT GAAGATAAGA TGTGCCGTTG CTAGACGTGT TGTGGATCTA ACGGTTGTTC TGGCTTTTTG TTTGTTTTTC AGAGTGCGCT GATTTTGTGG CTGGCGACGG TGTGCTTTGC TTTGACGTTG TTCACAACAT TACTCTAATT ATCAGCGGTG ACACTGTACC GGAGGTATTT GCGGGGCTGT TTGAAGCAGA CATGGACACC GCGATTGAAG AAGATCGGCT ACAAGACGAA TTGATTGAGA TCAATCCTAA CTCTACGGTG ATTGTCTTTC CCTCTCCCGT GGATGCTCCT GTCGATGCAC CGACGGATGC TCCTACACCC CTCGAGCCCA CGCCGGCGGA ACCGACCCCA GCGGAGCCCA CGCCGGCGGA ACCGACCCCA GCGGAGCCCA CGCCGGCGGA ACCGACCCCT GCGGAGCCCA CGCCGGCGGA ACCGACCCCT GCGGAGCCCA CGCCGGCGGA ACCGACCCCT GCGGAGCCCA CTCCGGCGGA ACCGACCCCA GCGGAGCCCA CGCCGGCGGA ACCGACCCCT GCGGAGCCCA CGCCGGCGGA ACCGACCCCT GCCGAGCCCA CGCCGGCGGA ACCGACCCCT GCCGAGCCCA CTCCGGCGGA ACCGACCCCA TCAGGCTCGT CGGAAGCCCC GTCTAGCGCT CCTTCAGGCT CGTCGGAAGC CCCGTCTAGT GCTCCTTCAG GCTCGTCGGA AGCCCCGTCT AGTGCTCCTT CAGGCTCGTC GGAAGCCCCG TCTAGCGCTC CTTCAGGCTC GTCGGAGGCC CCTTCTAGCG CTCCTTCAGG CTCGTCGGAA GCCCCTTCTA GCGCTCCTTC AGACTCGTCG GAAGCCCCTT CTAGCGCCCC TTCAGGCTCG TCGGAAGCCC CTTCTAGCGC TCCTTCAGAC TCGTCGGAAG CCCCTTCTAG CGCTCCTTCA GGCTCGTCGG AAGCCCCTTC TAGCGCTCCT TCAGACTCGT CGGAAGCCCC TTCTAGCGCT CCTTCAGGCT CGTCGGAAGC CCCTTCTAGC GCTCCTTCAG GCTCGTCGGA AGCCCCTTCT AGCGCTCCTT CAGACTCGTC GGAAGCCCCT TCTAGCGCTC CTTCAGACTC GTCGGAAGCC CCTTCTAGCG CTCCTTCAGG CTCGTCGGAA GCCCCTTCTA GCGCTCCTTC AGACTCGTCG GAAGCCCCTT CTAGCGCTCC TTCAGACTCG TCGGAAGCCC CTTCTAGCGC TCCTGATGGC TTGGATTAAG CCTCTTCCCA AGAGCCCACC GACCTTCCTA TGTAGGAAGG TCCTTTCAAG GCTTCTCATT TTTAGGTTTT ACAGAAGCAG TTCTCTAGGT CAATACGTTT CAACGCAATA AAAGCTGGTG TCAGTTTATT TACC
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Protein sequence | MKTSFALLSL FYPLLVLGIA QAQSAVSQQP DKLNNGVPSV LDVAGRRLKK GGSSYHGEGK GGTASSSADS KGKGGKGASG STKSTKSSKS RKSAKDPKSE KHPKATNAPA PVGTPVVAPV VAPIPSPVVA PVVAPIPSPV VTPVIAPVLS PTVPTMEVVG VEYNIAVGDT MGTDMMDLLT EIETDLVDAM DTLAPEIVAE ILAPGGRYLK ANVLALRNER RLNAVVQLPT AIDSLMMMEC ADFVAGDGVL CFDVVHNITL IISGDTVPEV FAGLFEADMD TAIEEDRLQD ELIEINPNST VIVFPSPVDA PVDAPTDAPT PLEPTPAEPT PAEPTPAEPT PAEPTPAEPT PAEPTPAEPT PAEPTPAEPT PAEPTPAEPT PAEPTPAEPT PAEPTPAEPT PAEPTPAEPT PAEPTPAEPT PSGSSEAPSS APSGSSEAPS SAPSGSSEAP SSAPSGSSEA PSSAPSGSSE APSSAPSGSS EAPSSAPSDS SEAPSSAPSG SSEAPSSAPS DSSEAPSSAP SGSSEAPSSA PSDSSEAPSS APSGSSEAPS SAPSGSSEAP SSAPSDSSEA PSSAPSDSSE APSSAPSGSS EAPSSAPSDS SEAPSSAPSD SSEAPSSAPD GLD
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