Gene PHATRDRAFT_50373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50373 
Symbol 
ID7199149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011697 
Strand
Start bp128191 
End bp129313 
Gene Length1123 bp 
Protein Length350 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185331 
Protein GI219130352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTGGATGAA ACAAGATCCT CCAAAATGAT CAGGCTAGCA ATACTCGTGC TGCGGGCTCT 
GTGCATCGGG CATCTATCGA TCGGATCAAG TTTGGCGATG CGGGCGCCCG ACATGCCTCC
ACTGCCGGAA GTTTCCATAT CGGGACACCA CACCTCCGAC TATACCGCCA AGCAGAATCA
TCCTACATCC TACGTCTCTT CGCCTTCATT CAAAGGCCCC TTGAAAGCAT CGAAGACTAT
CGGATATTCG TCCTCGGAAG TATCACTTCG CACGAGACTC GCCCAGTACG TCGCCGAAAA
CGATACCAAT CTTCCCTTCC TCCGGAAGCC TTTCAGATCC GCATCAGTGA CATCGCCACC
GCCATTGGTA GCTTCGGAAC GACCTAGTAC CCAAATGATC CTCAACGCCA TTTTGCAACA
GCTTGTGGCC CACAATGCGC CTATTGATGC CAAGGAAGTG ATGGAAAGTA CGGAGTTTTA
CCTATCTCTT CGCAAACGCA TCGGGGCGCC GCTCCAGATC GTCGATGCGT GCGCGGGACA
CGGCTTGACT GGTCTACTCT TTGCCGCAGG CAATCCCGGT CTCCAACGTC TACATGTAAA
TCTTGTGGAT GCCCGAGAAC CGGCGTCCTT CGCCGTTCTA CGCGACCTCA TGACGGACGT
TTGTCCCTGG ATACGAGATC GCGTCACATA CCACGCGCAA CCAATACAAG AATATGCGAC
TTCTATGCGG GATAAGGGTA CCAGTAGGGA TCGGAACGCA CCAACTGCTG TCATTGGCAC
TCACGCCTGT GGCAGCTTGA CGGACGAGGT CCTACATTTG GCAACCGAAG CACTCGAAGC
TGCTAGCGTT GCCGTCTTGC CCTGCTGTTA CACCGGAATG GCCAAGACGG TACCGTACGG
CGTTCAGCGG GCACACGGAG TAGCCTGGGC GGCCGATCTC CGACGTTCTT TTTGGTTGGC
GGAGCAAGGC TATCACGTAG ACTTTGCCTG TATCCCTTCC GAAATTACTC CCATGAATCG
CATCCTAATT GCCGAGAAGC GAAAAATGGA CAAATATACT GCACAAAATA AGAGGTAATG
GGTCGGGCTG TATATAGTAA ACAAGGCACC TCAATTCATT CTC
 
Protein sequence
MIRLAILVLR ALCIGHLSIG SSLAMRAPDM PPLPEVSISG HHTSDYTAKQ NHPTSYVSSP 
SFKGPLKASK TIGYSSSEVS LRTRLAQYVA ENDTNLPFLR KPFRSASVTS PPPLVASERP
STQMILNAIL QQLVAHNAPI DAKEVMESTE FYLSLRKRIG APLQIVDACA GHGLTGLLFA
AGNPGLQRLH VNLVDAREPA SFAVLRDLMT DVCPWIRDRV TYHAQPIQEY ATSMRDKGTS
RDRNAPTAVI GTHACGSLTD EVLHLATEAL EAASVAVLPC CYTGMAKTVP YGVQRAHGVA
WAADLRRSFW LAEQGYHVDF ACIPSEITPM NRILIAEKRK MDKYTAQNKR