Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50357 |
Symbol | |
ID | 7199182 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011697 |
Strand | - |
Start bp | 71243 |
End bp | 74059 |
Gene Length | 2817 bp |
Protein Length | 789 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185320 |
Protein GI | 219130329 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTCATC AAAATACATC CATGGCACGA AGAGTACTAA CAACACTTCT GGTATTTTCA GGGGCGATTC ATGTCTCGTC ACAGTTTAAC TCGGCTGTTC AGTGTCCCCA ATCTCCGGAT GTTACGGGCT ACGTATCAAT TGAAGCTTTG AATAATGATA TGGAGGCCGA GAGAGATAGA ATTCAGTCCG AAGGAGTTGA ATCCGCGCTC TCATCCTATA CATTTACACT ATGTCCAAAT CAAGTATTCG ATGCGGCAAA TGAGACGCTA ACTCCAGTGC TCAGTGGAGC GCAATTCGTC TGTGGAGCAA CTGGTTCATC TCAAGACAGT TGCTCCATCT CAAACGGACA AAATCAAGTC CTGATCGAAG ACTCAACAGT TGCAGGCTAT CCCATCGAAA CCGTTGGATT TGCTGGTGTA ACTTTTTCAC AGTTTGGAAC GTCTGCCATT GCGGGAGGCG CTGACTCGAC TACGACAGTG ATTCTTAATG ACCCTACTTT CTTGGTAGGT ACCCTTAACG CAACACGACT GATTTTTGTT CTGCTCTACT CACGTCCTTC TTTTTCGTCC AGATGAGCGG AAGCAGTTTC GCTACGCTTC AGCAAAATGG CGACCAGAAC AACCCGTTTT CACTAGAAGT TACTCGTGGG GCTGTGCGAA ACCTAGAAGT TGGCTCACCG CCAAGCGGCT CGATATTTGC AAATGAAGGA GGGGAACTCG CAATCAACGG CCTCGATGTC GTAAATCTTG ATGCTGCTTC CATCGTATCA TCATCCAACG GGGCAGCATC AATAATTCGT AGCGTCACCG TCTCTAGCAG TGACATCGAG GTACGATTCT CCATTTGCAT GGCTCTCCAT TTATTACCGA CAAAATCTTA CTCACCGTTT TCAATACCCT GTGCAGACTT TGTTTTCTAC TACCAACCGC GCTCAAACGA CTGCTGCTGT AATTGACGTG CAAAGAATGG GCAGTATGTC AGCGATTTTC GACTCAATGA TGGCGTCGGT GGCGATTTCT GGACTTAACG TTGTCAACAA CCAAATGCCG GAGCTGTGGA CTGGTGTTGC TTCGAGAGGT CTTTCTGATG TTTCCGTCAC CAACTCTACC TTTCGCGACA ACGCGGGGTC AGAGCATTTG TTTCTCGCCT CAACCGGTTC TCAAATAAAC GTGGATTCGA TCGAAGTCGC TGATTCGTTG GGTTCACTCA ATATTGTAAG AGACTTGAAA AATCTTCATC GACAGTGAGC AGGACACCAG CTTCTTACCC AGTTTGGATT TTCTAACAGA ATCGAGATAG ACCTAGCACC GTTCTAATCG CCATAAATTC AGCCGCTACA GCTTCTCGCG TGCAGGTATC AGGGGTGGGC ACAATGTCAG TAAGTACACG TGTTTGCCAC TTTTTAGGAT GTGCTGAGTC TTTGCGGTCT TATACATTTA ATGGCATCCC TTTTCTCTAT AGTCGGTTTT TTTTGTTTTC AATGAAAGCG ATGTGGGTAT GAGTCGAAAT TGTATTGTAG ACAGTGAAGT GGATGCGGCA GTCTTCGTCA GCGGGACTTC CAGCTCTACT TCGTCTCTGA ACTACATTAA TTCAACTCAA ACGCAAGTTT GTCAAGCGCC TGGCGAGCGC CTCGTTTTGG AGAATACTGG AGAGGCAAAC TGTTTCATTA CTGCCTTGTG TAACACGCGG TGCGGAGTTT GGGCCGACCA AGTCAGCTGT CGGGCGGATG AGCAAGTGAC TTCAGCTCCA ACACCTTTTA CGACGACCGC ACCGACCCTC GTCGAGAGCA CGGTACCAAT GGAAGTCGCT TCCGACACAC CTTCAAGTGT GCCAACAATG TCTATAGGAC CTTCTGCTAG GCCGCTTGTC TCTGATGTTC CAACGTCATC TGCTGTGACC AGTTTTCCGA CAGAAATCGC ATCCAATACC CCCACTATAA TGCCTACAAC CTCATCGGCG CCTACACTGG AAGGGTCCGA GCCGCCTTCT CAGCTCCCCA CCATAGAAGT GATGCAAAGT CCGACTTCGT CTCCAACTGA AGCCCCACCA TTTGACGGTG AGACATCTGC ACCAACGTTT ACGCCTTCTA CTGAGAGCCC AACATTTGAA GGGGAGACAT CCACACCCAC GTTCACGCAA TCAACACGTT TCCCAACGAA TAGCTCACCT CCTTCCGGGG TCACTTTGCA GCCTTCCTCA GCACAAAGCA TCGTCGCTTC ATCGTCTGCG CCCCCATCTT CCCTAGGTTC GGTCAGCTTC GCTCCATCGT TTCGACCGAC AGAAAAGACA AGCGAGTTTC CAAGTTCCAA GCCATCCTGC AGTACCGCGC CGCCTATTCT AGGAATCGGA AAGGGGAAAG GCAGTTCAAA AAGCTCAAAA AAATCGAAGA AGAGTGCCAA AGGCAAGGGA AAGGGCAGTG GAAAGGGCAA AGATTCGTCG TCCAAACAAG GTAAGGCCAA ACTTGAGCAC TTCTATTTAT AAAGTGGCAC AATGCATTTT CTAAACTTAC TGTCAAAAAT TTGCTTCCAG ACGATCCGCA ATTTGACCCT TTCTGCCAGC CCTCACATAG TCCGACCCTA AGCCTTCCAC CAACGGGAAA AGGATCGAGC AGAAGCAGCA ATAGTGGCAA AGGTGGTAAG AGCGGAAAGG GCAGCGCGGG TAACAAGAAT GGTAGTGACA GCAAAATGAA AATGAATAGA AGAAAACTTG AGGACAACGT CACAGTCAGT GACTCCAGAA ATGATTTCAT AGAAGTCACA GAAGAAATGG AATACAATGG GACCACAGAA CTGACAGTGA AACGCTATTT ACGGTAA
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Protein sequence | MCHQNTSMAR RVLTTLLVFS GAIHVSSQFN SAVQCPQSPD VTGYVSIEAL NNDMEAERDR IQSEGVESAL SSYTFTLCPN QVFDAANETL TPVLSGAQFV CGATGSSQDS CSISNGQNQV LIEDSTVAGY PIETVGFAGV TFSQFGTSAI AGGADSTTTV ILNDPTFLMS GSSFATLQQN GDQNNPFSLE VTRGAVRNLE VGSPPSGSIF ANEGGELAIN GLDVVNLDAA SIVSSSNGAA SIIRSVTVSS SDIETLFSTT NRAQTTAAVI DVQRMGSMSA IFDSMMASVA ISGLNVVNNQ MPELWTGVAS RGLSDVSVTN STFRDNAGSE HLFLASTGSQ INVDSIEVAD SLGSLNIVSG VGTMSSVFFV FNESDVGMSR NCIVDSEVDA AVFVSGTSSS TSSLNYINST QTQVCQAPGE RLVLENTGEA NCFITALCNT RCGVWADQVS CRADEQVTSA PTPFTTTAPT LVESTVPMEV ASDTPSSVPT MSIGPSARPL VSDVPTSSAV TSFPTEIASN TPTIMPTTSS APTLEGSEPP SQLPTIEVMQ SPTSSPTEAP PFDGETSAPT FTPSTESPTF EGETSTPTFT QSTRFPTNSS PPSGVTLQPS SAQSIVASSS APPSSLGSVS FAPSFRPTEK TSEFPSSKPS CSTAPPILGI GKGKGSSKSS KKSKKSAKGK GKGSGKGKDS SSKQDDPQFD PFCQPSHSPT LSLPPTGKGS SRSSNSGKGG KSGKGSAGNK NGSDSKMKMN RRKLEDNVTV SDSRNDFIEV TEEMEYNGTT ELTVKRYLR
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