Gene PHATRDRAFT_31133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_31133 
Symbol 
ID7199151 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011697 
Strand
Start bp179277 
End bp180155 
Gene Length879 bp 
Protein Length115 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185287 
Protein GI219130261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCAGTCCAGA ATCCTCGGGT GAAATCAGTA GAAGCCATGG TGCGTGGGAT GCGGTTCAGC 
GCAAACAGCT ATTGCGTAAC CCCAAGGATT TGAATAGTCG AATGTCAGAA AGAGGAATAC
TAAGCAAGAG CACGTGAGAG GAGATTTCTT CTACGATGTA TTTTTCAGAT TTTTGTACAT
TTCATGGACT GTCCTATGTT TGTAATTTCG TCGTGGCTCA CGTCGACGCT TCTTCTGTTT
AACTCTACAG GAAGTCGGTA AACTTATCGC AGTCATCGGT GATGAAGTAA GTCATGTTAA
TGCTCTGAAG GCGACCGCCA TGGTCGACCG CGTCGTTGTA TTAGAGAGGC AATATTTCAG
CGATCTCTTT CCAAGATTCC ATTTCGTTAG TATCAATTTC CTGGAGATAG GAATCAGATA
TACGGTCGGA CATTTCTTTT GAATGTTCAT ATCCGATTGT TTGTAGCTCG AAAATTTCCC
ACCTGACCAT TAGCGCTTTC CTCGTCCCTC CTAGGACACC GTCACAGGCT TCTTGTTAGC
TGGTGTAGGT CACCGCACGG CAGATGGGTC CAACTTTTTG ATCGTCAAGC AGGACACGAA
GTTGCAACAA GTAGAAGAAG CTTTCCAGAA CTTTTCTGTA CGTGACGATG TCGGTATCAT
TCTCATCAAT CAACACGTGG CCAACGATAT TAGACACATT TTAAAGGATT ACCACGAAAC
TATCCCGACT GTATTGGAAA TTCCTTCAAA GGAGCACCCG TACGACCCCG AACAAGACTA
TATCATGCAA CGGGTCAACA TGTTCCTTGG AGGTGGTATG TAGACAAGAC TACAGACAAC
ACTGGGATAT CCCATAATCG TAAACCCTCA TTGCTTGTT
 
Protein sequence
MEVGKLIAVI GDEDTVTGFL LAGVGHRTAD GSNFLIVKQD TKLQQVEEAF QNFSVRDDVG 
IILINQHVAN DIRHILKDYH ETIPTVLEIP SKEHPYDPEQ DYIMQRVNMF LGGGM