Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31133 |
Symbol | |
ID | 7199151 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011697 |
Strand | + |
Start bp | 179277 |
End bp | 180155 |
Gene Length | 879 bp |
Protein Length | 115 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185287 |
Protein GI | 219130261 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCAGTCCAGA ATCCTCGGGT GAAATCAGTA GAAGCCATGG TGCGTGGGAT GCGGTTCAGC GCAAACAGCT ATTGCGTAAC CCCAAGGATT TGAATAGTCG AATGTCAGAA AGAGGAATAC TAAGCAAGAG CACGTGAGAG GAGATTTCTT CTACGATGTA TTTTTCAGAT TTTTGTACAT TTCATGGACT GTCCTATGTT TGTAATTTCG TCGTGGCTCA CGTCGACGCT TCTTCTGTTT AACTCTACAG GAAGTCGGTA AACTTATCGC AGTCATCGGT GATGAAGTAA GTCATGTTAA TGCTCTGAAG GCGACCGCCA TGGTCGACCG CGTCGTTGTA TTAGAGAGGC AATATTTCAG CGATCTCTTT CCAAGATTCC ATTTCGTTAG TATCAATTTC CTGGAGATAG GAATCAGATA TACGGTCGGA CATTTCTTTT GAATGTTCAT ATCCGATTGT TTGTAGCTCG AAAATTTCCC ACCTGACCAT TAGCGCTTTC CTCGTCCCTC CTAGGACACC GTCACAGGCT TCTTGTTAGC TGGTGTAGGT CACCGCACGG CAGATGGGTC CAACTTTTTG ATCGTCAAGC AGGACACGAA GTTGCAACAA GTAGAAGAAG CTTTCCAGAA CTTTTCTGTA CGTGACGATG TCGGTATCAT TCTCATCAAT CAACACGTGG CCAACGATAT TAGACACATT TTAAAGGATT ACCACGAAAC TATCCCGACT GTATTGGAAA TTCCTTCAAA GGAGCACCCG TACGACCCCG AACAAGACTA TATCATGCAA CGGGTCAACA TGTTCCTTGG AGGTGGTATG TAGACAAGAC TACAGACAAC ACTGGGATAT CCCATAATCG TAAACCCTCA TTGCTTGTT
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Protein sequence | MEVGKLIAVI GDEDTVTGFL LAGVGHRTAD GSNFLIVKQD TKLQQVEEAF QNFSVRDDVG IILINQHVAN DIRHILKDYH ETIPTVLEIP SKEHPYDPEQ DYIMQRVNMF LGGGM
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