| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_24019 |
|---|
| Symbol | |
|---|
| ID | 7199201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011697 |
|---|
| Strand | + |
|---|
| Start bp | 191978 |
|---|
| End bp | 193524 |
|---|
| Gene Length | 1547 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185289 |
|---|
| Protein GI | 219130265 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGGCT TGCGTGTGGA AGATGCTTTA TTGTATCTAG ATGACGTCAA GCGTGAGTTT
AGAGGTCGTC CACACGTCTA CAATGAGTTC CTGGGGATCA TGAAGAACTT CAAATCGCAA
GAAGTCGATA CGCCTGGAGT CATTGCGCGG GTTTCCAAGC TGTTTCGGGG ATATAACAAG
CTTATTCTGG GTTTTAACAC TTTTTTGCCG GAAGGGTATA AAATCTCGTT GGCAGATCTG
GAGCGTCAAG AAGCCGAGCT GCGCAAGCTG GAGGCCATGC CACAGGCGCA ATTTCGCCAA
GGACCACCTC CGGCGAACTC GGAAAACGGA CCATCGCCGG CCAGTCCCGG ACCACCGCCA
CAACATCCTA CATCGCAACA GCATCCACAA CCAGCTTGGT CCCAATCATC AGAGAGTGCT
CCCGCGCCAC CGAAGGCCAA AGGTAATGGG CCGACACATC CCAAAAAGAA GAAGGGCCCG
CGCTCGTTAC CAACCAAGAA AGCCGCCGCT GCAGCGGCGC TACCTCCACC CCACCGCCAC
CGCCCCCAGA AAATCAGAAC CAAACGGTGG AATTCGATCA CGCGATTTCC TACGTCACAA
CAATCAAGAA GCGGTTCGTC CACGATCCTA GTACGTATCA CCAGTTTTTG GAGATCCTCC
ATACCTATCA GAAGGAGCAA CGGGGCATCA AGGAAGTCTT AGAACAAGTT GCCCATCTGT
TTCAAGATCA TCCGGATTTG CTCAAGGAAT TTACTTTTTT CTTGCCCGAT GCCGTTCAAG
AGCAAGCCAA GGAACGCCTG CATCGCGCTG CGGCGGAGTC GGAAACGCGA CTCGCCGCTC
AACGCCAGCA GCAATTGGAA CAATATCACG TTGATACTAA TGTCAAGAGT CCCGCGAATG
CCGTCAATCG CCAGCCCAAA TTTATCGACA TGACACACGC CAGTCAGGCC GCTGCTCTGG
CTCCAGGCCC GGAACCACAG CGTAAGCATC CTTTAGAAGG GGCGCCCCCG GCCTCGGCTA
TGGCCGATCA AAGCGAATCG TACGTTTACA ATGCTGCTGT CGAACGCCAG TTCTTTGACG
CTGCACGTGA AGCCATGTCA TTCAGTAGGG ACGGCGGACA GGCCTGGGCC GAGTTTCTCA
AGTGTCTCGA TATGTACGCC CAAGAGATTT TGACGCGAAC GGAGATGTTG ACATTCGTGG
AGCAAATTCT GGGCAAGCGG AACGCGAAGT TGTTGGAAGA GTTCAAGCGC ATACTGGTGT
CGGCTGGATC TCCTGATGGC CCCGCTCCTT TGCTGGAAGA TTCGTGGTAT TCTGTACCGT
TGTCTGAGAT TGACTTTTCT CGATGCCGTC GCTGCACTCC GTCGTATCGT GCGCTGCCTC
GTGATTACCC TGCACCACCT TGTGGTGATC GAAGCGACGA GGAGGCAAAG GTTTTGAATG
ACATCTGGGT CTCTTTACCG GTCGGCAGTG AGGAAAGCTA TACATTTCGA CACATGCGCC
GTAACACGTA TGAAGAGACG CTCTTTCGAG TTGAGGACGA ACGGTTT
|
|---|
| Protein sequence | MRGLRVEDAL LYLDDVKREF RGRPHVYNEF LGIMKNFKSQ EVDTPGVIAR VSKLFRGYNK
LILGFNTFLP EGYKISLADL EQNQNQTVEF DHAISYVTTI KKRFVHDPST YHQFLEILHT
YQKEQRGIKE VLEQVAHLFQ DHPDLLKEFT FFLPDAVQEQ AKERLHRAAA ESETRLAAQR
QQQLEQYHVD TNVKSPANAV NRQPKFIDMT HASQAAALAP GPEPQRKHPL EGAPPASAMA
DQSESYVYNA AVERQFFDAA REAMSFSRDG GQAWAEFLKC LDMYAQEILT RTEMLTFVEQ
ILGKRNAKLL EEFKRILVSA GSPDGPAPLL EDSWYSVPLS EIDFSRCRRC TPSYRALPRD
YPAPPCGDRS DEEAKVLNDI WVSLPVGSEE SYTFRHMRRN TYEETLFRVE DERF
|
|---|
| |