Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_55176 |
Symbol | |
ID | 7199065 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | - |
Start bp | 289691 |
End bp | 290700 |
Gene Length | 1010 bp |
Protein Length | 235 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185250 |
Protein GI | 219130181 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.21249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAAGTATGAG AGTACTCTCC ACCGTTTTAG CCTTGCTGGC GGCAACTGTT TCTGTAGAGG CTTTCGCTCC AGCGAATCTT AAGCCTGTCC GACCTTCTCT TTTCGCGCAG CGGTCGGATA GTATCGATGG CATTCAGGCT ATGAAGAATC TAGCAGTTTC CGCAGCCGTG GCTTTTATTC TTGTATCATC TCCTTCTGCT TCTCTAGCGG ATGGTACGTG CTTTGTGTCA TCAATGTGCT GACTTTGTGT TGTCCTTTCT GTCGTTTTGT CACTGAAATC CTGCGTTCGC ATCTACTTTC ATCAGGTCAA ACGAAAGACT TCAAGCTACC ACCTATTGAC TACGCGGATA AGAATCGCTG CGTCTTGAAC AGCAGCAGTA TGGGGCAGGC CAACGCGGCC CGTGACAAGC TCTTGGATCT CCGGGAGTGC AAGATCGCGG GCGCCAAGGC AACTGGGTAC GATCTTTCGG GTGTGATCAT GACAAACACG GATGCTTCCA ACGCCAACTT TGCCGAAGCG TATTTCAGCA AAGGATATCT TCGCGGTAAG TACTTGAGTG TCTTGGCTTT CGGAAGTGTG CCGGCGCTCA CTGATCTCTT TCGCAATTTT TTTGAGTAAC AGATAGCATG TTGGACGGCG CCGACTTTAC GAATGCAATT GTAGATCGAG CCACCTTCAA AGGGTCCTCT TTGCGAGGAG CTATTTTTGC CAATGCCGTT TTAACTGGCA CAGGATTTGA AGGCGCCGAC GTGGAGAATG CCGACTTTAC TGACGCGTAC ATCGGTGACT TCGACATTCG TCTGCTTTGC AAGAACCCGA CCCTCAAGGG TGAGAATCCC AAGACGGGTG CGGATACTCG CATGTCGGCG AACTGCAAAT AAAGAACTGC GTGCCATCTA GATTCTGCTG GATACATTCG ATTGAGGCCG ATCCCTGCAG CACCGTTTCT ATCAACTTGA TTGGTATGAG AAAGCTAATT TGTAACAAGT AGCGATTCTT TTCATATTAG
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Protein sequence | MRVLSTVLAL LAATVSVEAF APANLKPVRP SLFAQRSDSI DGIQAMKNLA VSAAVAFILV SSPSASLADG QTKDFKLPPI DYADKNRCVL NSSSMGQANA ARDKLLDLRE CKIAGAKATG YDLSGVIMTN TDASNANFAE AYFSKGYLRD SMLDGADFTN AIVDRATFKG SSLRGAIFAN AVLTGTGFEG ADVENADFTD AYIGDFDIRL LCKNPTLKGE NPKTGADTRM SANCK
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