Gene PHATRDRAFT_55176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_55176 
Symbol 
ID7199065 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand
Start bp289691 
End bp290700 
Gene Length1010 bp 
Protein Length235 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185250 
Protein GI219130181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.21249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAAGTATGAG AGTACTCTCC ACCGTTTTAG CCTTGCTGGC GGCAACTGTT TCTGTAGAGG 
CTTTCGCTCC AGCGAATCTT AAGCCTGTCC GACCTTCTCT TTTCGCGCAG CGGTCGGATA
GTATCGATGG CATTCAGGCT ATGAAGAATC TAGCAGTTTC CGCAGCCGTG GCTTTTATTC
TTGTATCATC TCCTTCTGCT TCTCTAGCGG ATGGTACGTG CTTTGTGTCA TCAATGTGCT
GACTTTGTGT TGTCCTTTCT GTCGTTTTGT CACTGAAATC CTGCGTTCGC ATCTACTTTC
ATCAGGTCAA ACGAAAGACT TCAAGCTACC ACCTATTGAC TACGCGGATA AGAATCGCTG
CGTCTTGAAC AGCAGCAGTA TGGGGCAGGC CAACGCGGCC CGTGACAAGC TCTTGGATCT
CCGGGAGTGC AAGATCGCGG GCGCCAAGGC AACTGGGTAC GATCTTTCGG GTGTGATCAT
GACAAACACG GATGCTTCCA ACGCCAACTT TGCCGAAGCG TATTTCAGCA AAGGATATCT
TCGCGGTAAG TACTTGAGTG TCTTGGCTTT CGGAAGTGTG CCGGCGCTCA CTGATCTCTT
TCGCAATTTT TTTGAGTAAC AGATAGCATG TTGGACGGCG CCGACTTTAC GAATGCAATT
GTAGATCGAG CCACCTTCAA AGGGTCCTCT TTGCGAGGAG CTATTTTTGC CAATGCCGTT
TTAACTGGCA CAGGATTTGA AGGCGCCGAC GTGGAGAATG CCGACTTTAC TGACGCGTAC
ATCGGTGACT TCGACATTCG TCTGCTTTGC AAGAACCCGA CCCTCAAGGG TGAGAATCCC
AAGACGGGTG CGGATACTCG CATGTCGGCG AACTGCAAAT AAAGAACTGC GTGCCATCTA
GATTCTGCTG GATACATTCG ATTGAGGCCG ATCCCTGCAG CACCGTTTCT ATCAACTTGA
TTGGTATGAG AAAGCTAATT TGTAACAAGT AGCGATTCTT TTCATATTAG
 
Protein sequence
MRVLSTVLAL LAATVSVEAF APANLKPVRP SLFAQRSDSI DGIQAMKNLA VSAAVAFILV 
SSPSASLADG QTKDFKLPPI DYADKNRCVL NSSSMGQANA ARDKLLDLRE CKIAGAKATG
YDLSGVIMTN TDASNANFAE AYFSKGYLRD SMLDGADFTN AIVDRATFKG SSLRGAIFAN
AVLTGTGFEG ADVENADFTD AYIGDFDIRL LCKNPTLKGE NPKTGADTRM SANCK