Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50336 |
Symbol | |
ID | 7199075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | - |
Start bp | 348430 |
End bp | 349764 |
Gene Length | 1335 bp |
Protein Length | 342 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185263 |
Protein GI | 219130208 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAATCATCTA ATACACAATC GTAACAGGGG AAGGATCATT GACTTTGTCG GATTCGTTAG TTGTGAAATC GGCTCACTGT TAATCGTTAT GCGCAACCTT TTTTTCCTCA ACAGACCGCC GCCCTTGAAC GCACCACCGC GTTTGTCCAG CGAACGCACA TGTTACCACA AGAAACCTTG CTTCCGCGAA CGATATGACT AGTTACGACG CTGTGGGGGG CCCCGCAGCC TTGCCTTTTG CGGCCCCCGC CGACGGAACG TCCAAGCCCA AGACTGCCAA GGGAAAGTCC TCGAAGACCA AGAAACAGAA GCAGTATCGA GCCAAGAAAC CGAAAGATAT GCCTCGCCGT CCACTCAGCG CGTACAACAT CTTTTTCAAA GAAGAGCGAG CTCGAATGCT CGCGAATGCC AGCGAAAAGG CAGCGTCAGC TGAAATCGAA GAAAACGAAG GAAATGAACC GGACGCCGCC CCGTCTACAA AAGGGAAAAT CGGATTCGAG GCCATGGCAA AAACTATTGG TAAACGATGG AAGGAGCTTG AAGCAGAAAA CCTCGAACGG TACAAGAAGC TCGCCAAGGA AGATATGGAG CGCTACCGAG TGGAAATGGA CAAGTATCAT CTGGAACTAG CAAAGAAGTC AAGAGTAGAG AGAGAAGAAG CAGCCAAGCT TGGTCCGATG ATGGGTGCAA CGAATGACCA GATGATTGGT GGGATGCAGG ACAACCAGAT GGCCATCGCA CAGCAGATGC AAGATCCTTC CATGATGGGA GCCGCACAAC TCGATCAGTT TCTGCGTGCG CAAATGATGG CTGCCGGCAA CGGATCTCCG AACGCCCAGT TCTCCGGAGC GCAGATGGGA ATGCCCCCCA ATTTTGGGGG CTTCTACCCT GGCTTCCAAG GAGCCATGGG CGGAATGCCG CAGAGTTTCG GTGGCGGGGC AGATGGGGGC GGACAACAGC TCGGTCAGCA GCAGAACTTT TTTCCAAATC CCATGATGCA AGGCATGCCT TTTCAGCAGA ACCAATTTAT GGGTGGGCAG CAAGAAGCGC TCATGGGACA ATTTGAACAA CAGCAGCAGT TCTTGATGCA GCAGATGGGG AATCAACAGT TCGGGGGAGC TGGCGCTTTC CCGAACGCCA GTGGCGGTAA TCAAGGGTAC AATTTTGGAA ACCAAGGCGG CGCTCAATTT GGACAATTCC AACAGGACGA TCAAAACAAG TGAGCAAAGG TGACCACTTC GGAAAAGTGT CTACGTACAA GCCATCATCA CCACAGGCAC TCATGGACGC CGACCAACAA ATATGTGTTA AATTAACTAT TAGTTATCTA TTTGG
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Protein sequence | MTSYDAVGGP AALPFAAPAD GTSKPKTAKG KSSKTKKQKQ YRAKKPKDMP RRPLSAYNIF FKEERARMLA NASEKAASAE IEENEGNEPD AAPSTKGKIG FEAMAKTIGK RWKELEAENL ERYKKLAKED MERYRVEMDK YHLELAKKSR VEREEAAKLG PMMGATNDQM IGGMQDNQMA IAQQMQDPSM MGAAQLDQFL RAQMMAAGNG SPNAQFSGAQ MGMPPNFGGF YPGFQGAMGG MPQSFGGGAD GGGQQLGQQQ NFFPNPMMQG MPFQQNQFMG GQQEALMGQF EQQQQFLMQQ MGNQQFGGAG AFPNASGGNQ GYNFGNQGGA QFGQFQQDDQ NK
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