Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50321 |
Symbol | |
ID | 7198980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | - |
Start bp | 293692 |
End bp | 295103 |
Gene Length | 1412 bp |
Protein Length | 424 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185251 |
Protein GI | 219130183 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AACAGAGCTA TTACACTAAA GCGATCTTAC CATGAGAAGT GCTAACATCA ACATCCGACA CTCTGAATTG TCTTGGAGGG TGCTTCTCCT CGCAACACTT GCTTTTCTCG GCATAGCAAC CGCCATTCGT CCTTTGACGA CCTCCGACGT CGAAGTTTAT TCGTTCGAAA GCTTTGTGGA AGACTTTTCC AAGACGTACG CCTCGCCCGA TGAATACGAG CATCGACGAG GAATTTTTTG CCGCAATCGA GACATCGTCC TCACGCACAA TCGACAGCGT CAGCAACACC AGCACCAGTT GGGCGTGAAC GAATTCATGG ACGCAACGGA CGACGAAATA CCCAAAGGAT ACGAAAAAGC TTCCAACACC CGTGCAACTC AGGCCATTGC TACCCAGCGT CGACTGAATG ATGAGCAGGG CTTGGAAAGT CTCGTGCTTT CGCCCGTTGC GGAACTTCCC AACAGTGTTG ATTGGCGCCA AAAGGGAGTC GTCACTCCAG TCAAGTCTCA GGGGGGTTGT GGGTCGTGTT GGGCTTTTGC GACGACTGCC ATGTTGGAAT CGCATGTAGC GATTCATGCG GGAGTCCTCT TTGAACTATC CACCCAAGAA TTGGTTTCGT GTATGGTAAA TCCACTCCAA TGTGGTGGGA ACGGAGGCTG CACTGGGGCT ACTGCCGAGC TCGCTTTGGA GTTTGTCCGA CAGCACGGAA TGGTGCAGGA GTGGGAATTT GGCTACCAAT CGTATCATGG TGCAGCGGTC AACTGTACCT TACAGGATGT AGAATCTGCT CTGCTTCGTG GTGCGAACAA GACGCACTAC AAGGGCGCAG TGGCTTCCAT TCAAGGGTGG GTCGCACTAC CAACGAACAA TTACACGACA CTGATGAATG CCGTTGCGAA AGTAGGGCCT GTAGCTGTCA GTGTTGCCGC TACTCCATGG GCACTGTATA AGGAAGGGGT ATTTGAGTCT TCCATGAAAT CGGAGAAGGA AACAAACGTG AATCATCTGG TTGTCTTGGA CGGGTACGGT ACGGACGAAG AAACAGGTGT GGACTATTGG TTGGTGCGCA ACAGCTGGGG GCCGATGTGG GGTGAGGATG GCTACATTCG TTTGAAGCGT GTTGATCCCG TGTCCCTGAC TGATCCAGAA ATGGATTGCG GTATGGATGT TACCCCCAGT GACGGCGTTG CTTGTACCAT TGATGACAAA GGCAACTCCG TGATTCCTCC GGCGGTGAAA GTTTGCGGAA CGTCGGGGAT TTTATTTGAC TCCAGTCTTC CCTTGGGACC ATACTTGGTA AAGTAGACGC AAGTAGCGGT ACAGATTAAA TCTTCTCTCT CGGCAGAATG TGTACACAAC CAAGTTAAAG ACCTTATCGC TTACGACTTA TAAATAGTCA GCTTCCAGTC CT
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Protein sequence | MRSANINIRH SELSWRVLLL ATLAFLGIAT AIRPLTTSDV EVYSFESFVE DFSKTYASPD EYEHRRGIFC RNRDIVLTHN RQRQQHQHQL GVNEFMDATD DEIPKGYEKA SNTRATQAIA TQRRLNDEQG LESLVLSPVA ELPNSVDWRQ KGVVTPVKSQ GGCGSCWAFA TTAMLESHVA IHAGVLFELS TQELVSCMVN PLQCGGNGGC TGATAELALE FVRQHGMVQE WEFGYQSYHG AAVNCTLQDV ESALLRGANK THYKGAVASI QGWVALPTNN YTTLMNAVAK VGPVAVSVAA TPWALYKEGV FESSMKSEKE TNVNHLVVLD GYGTDEETGV DYWLVRNSWG PMWGEDGYIR LKRVDPVSLT DPEMDCGMDV TPSDGVACTI DDKGNSVIPP AVKVCGTSGI LFDSSLPLGP YLVK
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