Gene PHATRDRAFT_50303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50303 
Symbol 
ID7198968 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand- 
Start bp239139 
End bp239991 
Gene Length853 bp 
Protein Length124 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185239 
Protein GI219130158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.13277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGATCACCAC CATGAGCAAG TCTTTCAAAG AGGAGCATCA ACTAGGTACG TTATCCCCAT 
TTGAGGCGGA GGTGCCCGAA AGAGCCAAAA GATAAACAAG TCCGTTAGTT TTCGTTCACT 
GAGGCGATTC AGAGAGAAAG CCGCGATTTT GTTGTTGACG TAATCGTGAC TCCATTCTGG 
GATTCTCTAC TTCCATAGCA AATTAATGTA GGACGACAGA GATTCAGGTT GGAAGCTTGA 
CATTCCTGTC GCGATTCGTG CACATTTTGT TTGAATATGA ATAGATTCGA TCTCCTTACT 
GCTAAACGGC TCTTTGTCTG ACTGGAATAT CGCTATTTTC GCTTTTAATC TGTACCTGCA 
GAAAAGCGCA AATCCGAGGC AGAGCGAATC CGCGCCAAAT ACCCAGACCG AGTTCCTGTG 
ATTTGCGAAA AAGCCGATCG GTCGGATATC CCGGACATTG ACAAGAAAAA GTATTTAGTA 
CCAGCAGACT TGACAGTCGG TCAGTTTCAT TACGTGATTC GGAAGCGAAT TAAGCTGGCG 
CCGGAAAAAG CGCTTTTTCT CTTTTGCTCG AACACAATTC CTCCGAATGC GGCGCTAATG 
AGTACCGTGT ACGAGGAACA AAAGGATGAG GACGGCTTTC TCTACATTCA ATACAGCGGA 
GAATCTACAT TTGGGGACGT AGACGCGGAA GAGGAGGAAT AAATTGTCGA GGGAAGTCAC 
CAGCTACTTT TAAGAGCCAA TTGCTCTAAA GAACTTTGCG AATCTGGGCC CAATTTTGCG 
GCCCTTGCCT GTGAGTACCT CAGTAAATAG AGCAATATTT GAATAAAGTA AGGAAGTTCT 
AGCTGTTACG CTG
 
Protein sequence
MSKSFKEEHQ LEKRKSEAER IRAKYPDRVP VICEKADRSD IPDIDKKKYL VPADLTVGQF 
HYVIRKRIKL APEKALFLFC SNTIPPNAAL MSTVYEEQKD EDGFLYIQYS GESTFGDVDA 
EEEE