| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50274 |
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| Symbol | |
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| ID | 7199116 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011696 |
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| Strand | - |
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| Start bp | 162302 |
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| End bp | 164212 |
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| Gene Length | 1911 bp |
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| Protein Length | 574 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185221 |
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| Protein GI | 219130121 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGTCC CGAACGCCAC ACCCAATTTC CTTCCGTACC GTGCCGTCCA GTTCCAACAA
CTGATTCCTG TAGCCCTGTC AAGTTTCGCC TACAGCGAAG CGTACGTACA CGGTACGACG
GTAGGGACCG CTTTCCAACG ATAACCCAAA ATGACGACGA CACGACGACA GATCGTTCGA
GCTTGCAAGG CCCGAGGCTG GACGATCCAG CCCGCGGCTT TGGCTGGCGT TGAAGCATAC
CTGGGATCAT CCCGGGACGG ATCTTTGGAA GATCTTCTCA ACGTCGTTGC CGAACGAATA
CCGGGACAGA CTTTAACGGG AGACTTGTGG GACGACATTG CGGGAGAAGC GGCGGATACC
GGTCGATCCG CGTCGACGAC GATGACGACG ACGGATGCGT GGGATGGTTT GCAAATTGTC
AACGCATTCC AATCACCCAA ACTAGTATTC GAAGTCATGC GCAAAAACTT TGCCGTGGAC
GAGAAGCCGC GCTCTTTGTT TGGTACTGCA GAAGATAAGG TGCGTCGATA CTCGAGACCG
GTATAGGTGT TGGAAAGAGC AACTACGAGT GCACTGTCTC ACCAGTCTAC TGTCTCGCTC
GTTACAATGT CTCTCTCTCT CTCAAACACA CATGTGCATT ATCGTGCGAC ATAGATCTCC
ATGCTGGCCC AGCGCTACGC CATGGTGCAC CAACGCATTC TACGACACAA GCTCTTCCGA
CCCGCAGATT TACACGCTCG CCAACAAAGT ATTCAACACA AGTTGACTCC GGTGGAATCG
CTGCTCGGGA AGCATGACAA CCAAAGTCTG CTCATACTGG GAATTCTACT ACAGATTGAA
GAAGGACAGT GGTACCTGGA AGATCCTACG GGACAGGTCC AAATATCCTT TCAAGACGCC
AGCGCCGTGG ACGGATTCTT TGTGACCGAG CATTGCATTC TCTTGGTCGA GGGTATGTTC
CGGGATGGTA CATTCTGCGT GCATCGTTTG GGTCATCCCC TCCTGGAGTC TCGCGAAACG
TCCTTACAGA CCATTCGACA ACAAGTCTTT CATCCCAGTT TTCGCAAACC CGTCCTCACG
GTCGGTAGCA TGACGAAAGA ATCCTCGTTG GTCGTTCTGT CGGACCTGCA CTTGGACCAA
CCCCGCGTGC TACAGCAACT CGAAAGTTTG TTCGCCACCT ACGACAAGTA TGCTCCCGAC
CGACTCCCCC TGTTTGTTCT CATGGGAAAT TTCTCGTCCA CCCCTCAGTC GCACCCTTCC
CAGCTCACTC CGCTACTCGA CGAATTGGCA ACCCTCATTG GATGCTTCGC GAATCTGCGA
GCCCACGCGC ACTTTTGTCT CGTGCCGGGT CCACACGACG GGGTTGGGTA CGTCCTACCC
CTGCCCGCGC TACGGAAAAC GCACGCCCTG GATAAGATCG CACACGTACA TCTGGCTTCC
AATCCCTGTC GTATCCAGTG GAGAGACCAA GATATCGTGG TCTTTCGTTA CGACTTACTC
CACCTCTTTC AGCATCACCA GATACGTTTG CCCGGAACCG ACCGCGCCGC ATCGGACGAT
GACGACCAAC ATGGCCGCCA ACCACATTGT CGCTTGCTCA AGACCATTCT GGATCAAGGT
CACGTCACAC CGGTCGCGGG TGTTCCCATC TTTTGGAATT TGGATCACGC TCTTTCCCTG
TATCCCTTAC CGACGGCACT GATACTGGGC GGGGACACCG CCACGCAAAA AGACGCCTTT
CACGAAGTTT ACGGTGGAGT CCACGTGCTT CATCCCGGCG CTTGGGATGA CGGGTCGTAC
GCGGTGTACA CGCCGGGACG CCCCGAGACA GCCATGGTGG CAGACGAGGA AGACGCGCCC
CGCGTCGTCG AATTTGGTCG GGTGGGCGAC AGCGTTCCAG CCGAGGCCTG A
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| Protein sequence | MVVPNATPNF LPYRAVQFQQ LIPVALSSFA YSEAYVHGTT IVRACKARGW TIQPAALAGV
EAYLGSSRDG SLEDLLNVVA ERIPGQTLTG DLWDDIAGEA ADTGRSASTT MTTTDAWDGL
QIVNAFQSPK LVFEVMRKNF AVDEKPRSLF GTAEDKISML AQRYAMVHQR ILRHKLFRPA
DLHARQQSIQ HKLTPVESLL GKHDNQSLLI LGILLQIEEG QWYLEDPTGQ VQISFQDASA
VDGFFVTEHC ILLVEGMFRD GTFCVHRLGH PLLESRETSL QTIRQQVFHP SFRKPVLTVG
SMTKESSLVV LSDLHLDQPR VLQQLESLFA TYDKYAPDRL PLFVLMGNFS STPQSHPSQL
TPLLDELATL IGCFANLRAH AHFCLVPGPH DGVGYVLPLP ALRKTHALDK IAHVHLASNP
CRIQWRDQDI VVFRYDLLHL FQHHQIRLPG TDRAASDDDD QHGRQPHCRL LKTILDQGHV
TPVAGVPIFW NLDHALSLYP LPTALILGGD TATQKDAFHE VYGGVHVLHP GAWDDGSYAV
YTPGRPETAM VADEEDAPRV VEFGRVGDSV PAEA
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