| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50215 |
|---|
| Symbol | |
|---|
| ID | 7199001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011696 |
|---|
| Strand | + |
|---|
| Start bp | 12413 |
|---|
| End bp | 13730 |
|---|
| Gene Length | 1318 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185105 |
|---|
| Protein GI | 219129879 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.125172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGCAGATTTC AGGCGACAAC AACGCCTTGA TCTTTTTGTT CAGCTATTGA CGTGAAAGCA
ATGAACATCT ACGGCAAACT TCTGGTGGCA TGTGTCCTCC AAACTAATGT TTGGGGGACC
GCTGCTTTCG TTACCCAAAA GTCGAAGGGG TTTGCTTTCA GAGGAACAGA TGGGTTATCG
CCAACTGTGT CATACTTGGA TAGCAACGGG AAAGGATCGT ACATGGCTTC ATCCAAATTG
GCGTCCTCCG AAGGGTCGAC ACAAGGCGAA GGTGTTATGG ACAACAGTCA ATCTAGGGGA
CCCTCTAGTA GTAGCCCAGC GGTATGTCCT CTTACGAACA TGGTCCAATA TAATGTCCTA
GTCATGTATT CTCAAATGTC GTCCCTCCCA ACTTTAAAAA CAGAGCGTAT TGGACGCACG
TCTTACTGCC CTAGAACAAC AGCAAAACCG TGGGGCACAA GGCGGTGGAC GTCCCCAAAA
CCAACCGAGG AAGCTTTGGG ATAGCAGATC GGCAGTAATA GTTCAAGGAG GATCTTTGAA
GACATGGTCT TTCCCTAACC CCTCGGTTGA GAGAGTCCAG GTTGTGATGA ACACAGAAGG
TCGTCCGCTG GATGCCGACA TCGAATTGTG GCAGGGACCT GATAACACTC CATTCAAAAT
GCGAGTGTAC GTTGAGGACG GTAGCTTGCG CCCATTTCGC GCAGTGATTG AAACTCCGCG
CGGACCCAAT ACGATCGCGA TTCGCAACAC GGGTCACCTC GAGTTCCCTT TGTCTTCCTA
CGTAATGGCT GGCTCTGCGG ACAATGGTTT TGTTGCCAGT TCAATCGACG AAAGTACCCC
AAGAATAATC CAGGGTGGAG CCTTGCGCAC ATACCCGTTC AACCCGTCTG TCGAAAGCGT
GCAAGTTGCT TTGCGAACGG ACGGACGTCC ATTGAACGCA AGAATTGAGC TGTTGCAGGG
GCCCAACAAC AACAAGCAGG TTATTGAGCT TTACACCGAA GACGGAATGG ATCGTCCTTT
TTTCGCCGTC ATTGAGACAC CCGGAAGCGG AAATGTTGTG CGAGTTGTCA ACACAGCAAC
CGTCGAATTC CCCATGACCG CCTTGGTTGA GGCTTACCAG GTCGGAAACA GCAGATCCAA
CGCAAACACT GTGATCGGAG GCGAAGGAGG CGGGTTCATG GACCGTTCAT GGTAGGGAAG
GGGTTTAATG TTTCTAGTGA CTGTGAATTA AGTGCCACCT TTTTTGTTCG TGTGCGTCTA
AATTATGACA TAATAAAATC CAAACCTTTA CATAATGAAC ACATCTAATA GGTTTTTG
|
|---|
| Protein sequence | MNIYGKLLVA CVLQTNVWGT AAFVTQKSKG FAFRGTDGLS PTVSYLDSNG KGSYMASSKL
ASSEGSTQGE GVMDNSQSRG PSSSSPASVL DARLTALEQQ QNRGAQGGGR PQNQPRKLWD
SRSAVIVQGG SLKTWSFPNP SVERVQVVMN TEGRPLDADI ELWQGPDNTP FKMRVYVEDG
SLRPFRAVIE TPRGPNTIAI RNTGHLEFPL SSYVMAGSAD NGFVASSIDE STPRIIQGGA
LRTYPFNPSV ESVQVALRTD GRPLNARIEL LQGPNNNKQV IELYTEDGMD RPFFAVIETP
GSGNVVRVVN TATVEFPMTA LVEAYQVGNS RSNANTVIGG EGGGFMDRSW
|
|---|
| |