Gene PHATRDRAFT_41282 details

Gene Information

• Locus tag: PHATRDRAFT_41282
• ID: 7199082
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011696
• Strand: +
• Start bp: 378134
• End bp: 378751
• Gene Length: 618 bp
• Protein Length: 173 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002185186
• Protein GI: 219130047

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000037701
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAAT CGGTCGATTC GGTCCGCTTG AACCTACAAT CGGTCCGTAC GGGTCGAGCC 
TCGGCCCAAA TTTTGGATCG CGTCAAGGTG GATTACTACG GCGTCGAAAC GCCGCTTAAC 
CAAATGGCCA CGATCAGTGT TCCATCTGCC CAGCAACTGT CCATTGATCC TTACGATAAA 
ACTTCTTTGA ACAATATTGA GACTGCTATT GTGGAATCAG ACTTGGGATT GACTACAAAC 
AACGATGGAT CCATCATCCG CATCAACATT CCTTCCATGA CAGAAGATCG GCGTAAGGAG 
ATGCTAAAGC TCTGCAAGTC CATTGGGGAA GAAGGAAAGG TTGCGGTTCG GAATATTCGA 
CGGGATGGTC TAGACACCAT CAAAAAAATG GAGAAAAGCA GTGATATTGG TACGTGCCGA 
ATAATGCAAT TGAACGGCCG CGCTCACACT GTCTCGTTTC TGATCTAACG ATTTGCTATT 
CGGAATCCTC TGGTTCCATT CGTAGGCGAG GACGAAATGA AGGATGGTCA AGACACCATG 
CAAAAGCTCA CCGATAAGAA TGTCAAAGAA ATTGATGAAG TTGTCGGTGC TAAAGAGAAG 
GAAGTCATGA AGGTTTAG 

 

Protein sequence

MAKSVDSVRL NLQSVRTGRA SAQILDRVKV DYYGVETPLN QMATISVPSA QQLSIDPYDK 
TSLNNIETAI VESDLGLTTN NDGSIIRINI PSMTEDRRKE MLKLCKSIGE EGKVAVRNIR 
RDGLDTIKKM EKSSDIGEDE MKDGQDTMQK LTDKNVKEID EVVGAKEKEV MKV