Gene PHATRDRAFT_41254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41254 
Symbol 
ID7198984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand
Start bp307008 
End bp307862 
Gene Length855 bp 
Protein Length284 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185255 
Protein GI219130192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.401564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACCCG CTTCCTCGGA AACAGTATCT ATCGAAGGAG ATCAATTCTT TCTTCATACT 
TGGACTCCCG ACCTTAAGCC ACGTGCGATT TGCGTCGTCT TTCACGGTTT TCTTGCACAT
GGCGTATACC CGACTGTGCG ATACGCTGCT CAGTTGCTCG CTGAGGCAAA CTATCTTGTT
GTTGCAGCTG ACATGCACGG CCACGGGAAG TCCCCGGGTA GCCCCGGTCT CTTGCCGTCG
GCAGAAAAGG TGCTCGAAGG GGGCCGCAAG GTTGTGACGT ACGCAAGAGC TTTGGATCCG
ACATCCAAGA TTTTCCTTTT GGGATCCAGT ATGGGAGGAA CTATAGCACT TTCGGTCGCC
AACCACATGT CAGACGTTTC TGGGGTTGTT CTCCTCGCAC CCATGCTTCA ACTTGCGGTA
AGTACTCCTG AAAGAATATT GTTGTCGGGC TTGGCGTCCT TACCGTGGGT GAATAATTGG
CAAGTAATCC CAAGCTCGGC GGCCTCCTCT GACAAGCAAT ATCGAGACCC AATCCGTCGC
AAAGAATGCG AGGAAGACAA ACCCGCTGAA GCACGTAGTT CCTTCATCGC GATCGCATCA
GCATCGACCT GTGTTCAACT GGCCCACGAC ATCCAACAAG AATTGCCGAA CGTAACTACC
CCCTTCCTAC TAGCTGTGGC GGAAGAAGAC GTAGTGGTTA AAAACCAAGG CTCCTACGAT
CTATACGAGA AATCTCCATC TATTGACAAG ACCATGAAAA AATATGCTGC TTTGCATGGA
CTACTTTGTG AGCCGTCCCC TTTGCGAGAA ATGGTTGAAC AGGATATTAT CGAATGGCTA
AATGCCAGGT GCTGA
 
Protein sequence
MPPASSETVS IEGDQFFLHT WTPDLKPRAI CVVFHGFLAH GVYPTVRYAA QLLAEANYLV 
VAADMHGHGK SPGSPGLLPS AEKVLEGGRK VVTYARALDP TSKIFLLGSS MGGTIALSVA
NHMSDVSGVV LLAPMLQLAV STPERILLSG LASLPWVNNW QVIPSSAASS DKQYRDPIRR
KECEEDKPAE ARSSFIAIAS ASTCVQLAHD IQQELPNVTT PFLLAVAEED VVVKNQGSYD
LYEKSPSIDK TMKKYAALHG LLCEPSPLRE MVEQDIIEWL NARC