Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41116 |
Symbol | |
ID | 7198999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | + |
Start bp | 3636 |
End bp | 4118 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185102 |
Protein GI | 219129872 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0600657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTGTC CGAGGAAGGT CACTCCCGCT GTTCCGGCTC CTGCCGCAGC GACGGACTCA CCGGCTGATG CCGCGTCCGC ATCCAAACAG GATGAGGAGT TCGGAGGATT CGACTCCTCC GACGGTGAGG AGCCTTCGGG CACCGCACCG CCATTGCCGG CATATCTGGA TGATGAAGGC AATGGCAAAA AGACTGCAAA GCCTTTGGCT CGCAGCAAGA ACACGTCTGA CAAAGTCAGC GTGATGGAGA AAAACGTCAT TGACGTAGAG CCTCACTCTA AAGACAGTGA CAGTCTCGAC TCCGTTCCTC GGCAAGACCG TGTTGAACAA AAGGCCTTGA TGGTCGTCCT CCGTGACGTC ATCTGTGTTC CATTGTCAGT TGCGGCTGCA ATGTTGAACA ATGGCATTAA ATCATCTGAT GATTTCCGTC TTCTCACAAA GGAGGACATC AATGATCTCT GCATGCGGCT CAAAATGGGC TAA
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Protein sequence | MHCPRKVTPA VPAPAAATDS PADAASASKQ DEEFGGFDSS DGEEPSGTAP PLPAYLDDEG NGKKTAKPLA RSKNTSDKVS VMEKNVIDVE PHSKDSDSLD SVPRQDRVEQ KALMVVLRDV ICVPLSVAAA MLNNGIKSSD DFRLLTKEDI NDLCMRLKMG
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