Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_1719 |
Symbol | |
ID | 7199022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | - |
Start bp | 100368 |
End bp | 101612 |
Gene Length | 1245 bp |
Protein Length | 415 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185207 |
Protein GI | 219130091 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTCACACTAG ATGAGAGTTT GATTGAAATG CGGGAATTAA TAAAAACTGC CGGACTTGAG CTAGTCGGTG AGGTGACGCA ACGATTGAAC GATGTCAACC CGAGGACGTA CATTGGCTCC GGAAAAGTCA AGGAAGCAGA AGAGAAAATG AAAGAGTACG ACTGCTGCAC GATTGTATTT GACGCAGAGT TGTCACCAGG TCAGCAGAAA TCGCTGGAGA ATGCCTTCAA CAAAGAATCT CTGCAAAACG ATTTTCTGTT TCAAGGAGGA GAAATCAAGG TGATTGACCG GACGGCACTG ATTTTGGATA TCTTTGCGCA GCATGCCAAA ACTCGTGAAG GTAAGCTGCA GGTCGACCTC GCCTTGCATG AGTACCGCAA ACCTCGCTTG ACCCGAATGT GGACGCATCT AGAACGGCAA TCCGGAGCTG GTGGTGTTGG TCTTCGCGGC CCGGGAGAGT CGCAGCTAGA GATCGACAAG CGGCTAGTCC GGGATCGTAT CATTACTTTG AAGCAAAAGA TTGATGATGT GCAAAAGCAA CGAGCGATGC ATCGGCGGGG TCGGGAGCGG ACAGGTCTTC CTATCTTATC GCTGGTCGGC TACACTAACG CTGGTAAATC AAGCATGCTA AACTATTTGA CCAAAGCAGG CGTCATGGCC GAATCCATGT TGTTCGCCAC ACTGGACCCT ACAACTCGGA AAGTAAAGTT ACCTGGCTAC AAGACACACC CAGAAGTACT GTTGACAGAT ACGGTCGGCT TCATTCAGAA GCTGCCGACG CATTTGGTGG CGGCATTTCG CGCCACTCTC GAGGAAGTAC AGGAAGCAGA CGTGCTGATT CACGTCATCG ACGTTTCCAA TCCTACCTGG CGTAAGCAAG AGCAATCCGT TCGCAGCGTA CTGGCGGACA TTGAAGCTTC CGACAAGCCA ATGGTCCGCG TTTTGAACAA GATCGACTTG CTTGATCCCG TAGAGGCGGA TGAGTTGAGA TGTCAAGCTG CGTTGGAGGA TTTCACAGTT GCAGTCTCTG CTTTAGAAGG AGACGGCATG CAAGATTTCG TGTCTGTGGT GGAAGATGCC ATGTCGAGCT TGCTCGTACC CATTGAAGTA GAACTTCCGT ATTCGAAAGG AGAGGAATTG AATATAGTAC ACGAGCAAGG GAATGTCGAA GTCGTTGACT ACAGAGAAAA GGGAACCTAC GTACGCGCGC TTGTTCCACA GGCTGTGGCG AACCGATTGG AGCCC
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Protein sequence | FTLDESLIEM RELIKTAGLE LVGEVTQRLN DVNPRTYIGS GKVKEAEEKM KEYDCCTIVF DAELSPGQQK SLENAFNKES LQNDFLFQGG EIKVIDRTAL ILDIFAQHAK TREGKLQVDL ALHEYRKPRL TRMWTHLERQ SGAGGVGLRG PGESQLEIDK RLVRDRIITL KQKIDDVQKQ RAMHRRGRER TGLPILSLVG YTNAGKSSML NYLTKAGVMA ESMLFATLDP TTRKVKLPGY KTHPEVLLTD TVGFIQKLPT HLVAAFRATL EEVQEADVLI HVIDVSNPTW RKQEQSVRSV LADIEASDKP MVRVLNKIDL LDPVEADELR CQAALEDFTV AVSALEGDGM QDFVSVVEDA MSSLLVPIEV ELPYSKGEEL NIVHEQGNVE VVDYREKGTY VRALVPQAVA NRLEP
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