Gene PHATRDRAFT_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_1719 
Symbol 
ID7199022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand
Start bp100368 
End bp101612 
Gene Length1245 bp 
Protein Length415 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185207 
Protein GI219130091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCACACTAG ATGAGAGTTT GATTGAAATG CGGGAATTAA TAAAAACTGC CGGACTTGAG 
CTAGTCGGTG AGGTGACGCA ACGATTGAAC GATGTCAACC CGAGGACGTA CATTGGCTCC
GGAAAAGTCA AGGAAGCAGA AGAGAAAATG AAAGAGTACG ACTGCTGCAC GATTGTATTT
GACGCAGAGT TGTCACCAGG TCAGCAGAAA TCGCTGGAGA ATGCCTTCAA CAAAGAATCT
CTGCAAAACG ATTTTCTGTT TCAAGGAGGA GAAATCAAGG TGATTGACCG GACGGCACTG
ATTTTGGATA TCTTTGCGCA GCATGCCAAA ACTCGTGAAG GTAAGCTGCA GGTCGACCTC
GCCTTGCATG AGTACCGCAA ACCTCGCTTG ACCCGAATGT GGACGCATCT AGAACGGCAA
TCCGGAGCTG GTGGTGTTGG TCTTCGCGGC CCGGGAGAGT CGCAGCTAGA GATCGACAAG
CGGCTAGTCC GGGATCGTAT CATTACTTTG AAGCAAAAGA TTGATGATGT GCAAAAGCAA
CGAGCGATGC ATCGGCGGGG TCGGGAGCGG ACAGGTCTTC CTATCTTATC GCTGGTCGGC
TACACTAACG CTGGTAAATC AAGCATGCTA AACTATTTGA CCAAAGCAGG CGTCATGGCC
GAATCCATGT TGTTCGCCAC ACTGGACCCT ACAACTCGGA AAGTAAAGTT ACCTGGCTAC
AAGACACACC CAGAAGTACT GTTGACAGAT ACGGTCGGCT TCATTCAGAA GCTGCCGACG
CATTTGGTGG CGGCATTTCG CGCCACTCTC GAGGAAGTAC AGGAAGCAGA CGTGCTGATT
CACGTCATCG ACGTTTCCAA TCCTACCTGG CGTAAGCAAG AGCAATCCGT TCGCAGCGTA
CTGGCGGACA TTGAAGCTTC CGACAAGCCA ATGGTCCGCG TTTTGAACAA GATCGACTTG
CTTGATCCCG TAGAGGCGGA TGAGTTGAGA TGTCAAGCTG CGTTGGAGGA TTTCACAGTT
GCAGTCTCTG CTTTAGAAGG AGACGGCATG CAAGATTTCG TGTCTGTGGT GGAAGATGCC
ATGTCGAGCT TGCTCGTACC CATTGAAGTA GAACTTCCGT ATTCGAAAGG AGAGGAATTG
AATATAGTAC ACGAGCAAGG GAATGTCGAA GTCGTTGACT ACAGAGAAAA GGGAACCTAC
GTACGCGCGC TTGTTCCACA GGCTGTGGCG AACCGATTGG AGCCC
 
Protein sequence
FTLDESLIEM RELIKTAGLE LVGEVTQRLN DVNPRTYIGS GKVKEAEEKM KEYDCCTIVF 
DAELSPGQQK SLENAFNKES LQNDFLFQGG EIKVIDRTAL ILDIFAQHAK TREGKLQVDL
ALHEYRKPRL TRMWTHLERQ SGAGGVGLRG PGESQLEIDK RLVRDRIITL KQKIDDVQKQ
RAMHRRGRER TGLPILSLVG YTNAGKSSML NYLTKAGVMA ESMLFATLDP TTRKVKLPGY
KTHPEVLLTD TVGFIQKLPT HLVAAFRATL EEVQEADVLI HVIDVSNPTW RKQEQSVRSV
LADIEASDKP MVRVLNKIDL LDPVEADELR CQAALEDFTV AVSALEGDGM QDFVSVVEDA
MSSLLVPIEV ELPYSKGEEL NIVHEQGNVE VVDYREKGTY VRALVPQAVA NRLEP