| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55150 |
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| Symbol | |
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| ID | 7198835 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011695 |
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| Strand | + |
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| Start bp | 129805 |
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| End bp | 132481 |
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| Gene Length | 2677 bp |
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| Protein Length | 406 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | homeodomain transcription factor |
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| Protein accession | XP_002184972 |
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| Protein GI | 219129600 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.57662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACCGACGGT CAACTGCAAC CATCGATCTA CCCATCAACT CGAATAAAAC GGTTGCAATC
ATAAGGTAAG ACAAGCTGTT ACTGCACAGT GTCGGGTAGC TTCGTACCGC CGCGTTGTTA
CTTTCGTGCT GGTTGATATG ACTAAACATC CACGCCGCCC AAAGCTGGCA GCGCTCCGAG
TGAGAATCGA CGTGAAGGTA ATATTGACAA TCCGTGTCGG TCGTGATGTA AGCGAGCCGC
TGTATTGCTT GCGCATAGCA GGGGAAACTC GTGTGGCATG TTGACCGACT CCATGGACGC
GTATATATTG CAGTACGAGC TTGCCTTGCG AGAATAACGT TGCGTGACGA ATGTCAATCC
GTCTCGATCT GCTTCCAATG AGAGTCGAGG CTTTCCTGCT TTGATGGCTG TTAGATTCCC
GGGATCAGAA GTCGGCCTGC CACGACTATT TCTAAGGTAG TGCAGTTTGG CATTTGAATC
CCAACGACTG CTCGTTCGTC CTATTCATGG ACACCCAGCT AGTTCCGAAA GAAAAAAAAA
ACCACTCCGT CCATGGACGA GCCTTCATGT TGGACCGCGA ACAACGCGCG ATATCGTGTG
ATGGGTTTCC TTCCCGCTTT TACCGATGTC GTCCCGGAAC TGGGACAACG ATACAAAATT
TCGGTTTTAG GATTCGCAAG TTTCCGGGTT GGTGCTTACG TGGGCCAGCA AACCACACGC
CTCGTCGCCC ACCTCATCGC CTTGGAAGGT TTTGATTGGT CGCCATCATA TGGCTCGTGA
GGCGTCCTCC CTTTCAGACA CCCACGCGTT CGTGTCTCTC TTGGTTGTTG CCGTTCCAAT
GGGAAAATAT CCATCCATCA GAAACCAATC CACTGCCCAT CGGCACTCAC ACTTTTTGCG
TTCCGCGAAT CCATCACCAG CACAGATCGA CTGTATCATC GATACCAAGT TTCTCACTAA
CAATCGAAAA TTGTCACAAT GATGGAAGGA TCAGTCTCTG AAGCCCCCAA CAAACACGGG
TCGACAAGTA ATCCCGTAGC GACACGTGTC CGCGCTGTTT CGGTTTCCAA CGCGTCATCA
ACCTCCGCCA GTAAAACCAA CAAACGCAAG TCTACCAGTC TGCCCACCGA GACTGTCGAA
TACCTAAAAG CATGGATGAT GAGCCCGGAA CACATTGCTC ATCCATATCC GACGGAACAG
GAAAAGGCCA AGATCATGGC GGACACCTGT ATCGAATTGA AGCAACTCAC CAACTGGTTC
GTCAATAATC GCAAGCGCTA CTGGAAGCCA AGAGTCGAAG CCCGCGTCCA GACGCAAGCT
TCCTTCAAGA CTGCCCCATC CAACACTAGC AAAAACACTG CTGATACGGA GACCGCCCCG
GTTGATCTTT TCGACCCTGA TTTGGCGATT GTGGCAACGA CAACCGGCTC GGCGAACCAA
CCAGAGATCT CCGCTCCGAG TGACGTTCCG TTGGCCAAGA TTGTTTCTGT TGCCAGCTTT
CAAGCTCTTC TGGAAAAGGC TTCTGTCAGT CTATCGCCGA TCAGTACTCA CAACTCCGTC
TTTCACCACG TGGAATCACT CCTCAATGGT CCTTCTCGAC TGGTTTCGGA TGCGTCCGAC
AGCAGCTCGA TTGGAACCGA GGACGAAACC TCGAGCAACA CTAGTACCGC AGGGTCTGTC
ACAACGCCAC AGTCGGAGGG CATCAAGACG GAACAAACAT CGGTTCACAT ACTGCGTCAT
ACCGGACAAG TCCCGACAGT CGAAGATGTT ACGATCCTTA CCAATGTTCC GGCGGAACGC
ATTCTCCGAA CCTTTGATGA TTGCGTCTTG AGTTACCGCG TGCCCACGTC CGGGAATCGG
AAAAAGGTAG GTCGTGGGAG TCCTGGAGCT CGGAGCACTT TGCGGCGATA TCTCTTGATT
GGTAATAGTG TCTCACAATC TCCGTTCGTT TGGTTTCGCA GAGTCAAAGT CGTCGGGACG
CCGAAATCGT ACGCACCAAG AAGCACTACC TCAAGGTTTA CATGGCAGAA GTTGCGGAAG
CGAGCAAGGC TCGCAACGAG ATCCGTGCTA CGGCTTGGAC CAAACGAGCC CGATCACCAG
CGGGAAATGA GGCTACCGCG GAAGACCCTT TGTCGCCCCG CGCTAAGTTT CGCCGGGTCA
GTGTCCAACT TTGGCAGGAT GCCTGCCGAT CGGCCTCGCA CGGGTATGAC CACGATGCGT
TACCAACCTT GGAAGAAGCT TCGCAGCTTT TTGGCTACAG CAATAGCGAT TGCGTCGACT
GTGTATCCAA CTAGTCTCAA GACGTACCGG GGCCTTCTGT GTTTTTTGGC TCTTTTATCT
GCGCACCTTC ACCCGCTCAA TCCACCACTC GCTCGCGGAC TGCCTGTCAC ACATTCACGT
CTTTCCTTCT GTCTCGGCTC GACGAGGCAT CGCATCACCA CTTGATTTAC ACTGCCGGCC
TGCCGTCAAT CAAGGCAACG GCGTCTACCT AGATTACGAA TGGCGCCGTG ACAAAGCTAC
ACTCGCGGCA CTTGCAATTC GAGGCCGGAT TGCACCCGTT TTCTCCTTTT TGTATTTGAT
CCATCTACTC ATCTTATTCG CAAGGGTATG TTTCCTCAAT GCCTGTTTTC GCACAAAATA
ACCACGTTAT AACGATAGTC CACCAAGGTT TAGCATC
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| Protein sequence | MMEGSVSEAP NKHGSTSNPV ATRVRAVSVS NASSTSASKT NKRKSTSLPT ETVEYLKAWM
MSPEHIAHPY PTEQEKAKIM ADTCIELKQL TNWFVNNRKR YWKPRVEARV QTQASFKTAP
SNTSKNTADT ETAPVDLFDP DLAIVATTTG SANQPEISAP SDVPLAKIVS VASFQALLEK
ASVSLSPIST HNSVFHHVES LLNGPSRLVS DASDSSSIGT EDETSSNTST AGSVTTPQSE
GIKTEQTSVH ILRHTGQVPT VEDVTILTNV PAERILRTFD DCVLSYRVPT SGNRKKSQSR
RDAEIVRTKK HYLKVYMAEV AEASKARNEI RATAWTKRAR SPAGNEATAE DPLSPRAKFR
RVSVQLWQDA CRSASHGYDH DALPTLEEAS QLFGYSNSDC VDCVSN
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