Gene PHATRDRAFT_5132 details

Gene Information

• Locus tag: PHATRDRAFT_5132
• ID: 7198945
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: +
• Start bp: 245675
• End bp: 246427
• Gene Length: 753 bp
• Protein Length: 225 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002184995
• Protein GI: 219129648

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0355992
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AAAGTGGAAG GAAACGAAAG CCAGATCCTC ACTGTTGCTC TAGAGCCCGG TCAAGTGCTG 
CGCGCGGAAA GCGGTGCCAT GATGTACATG ACGGATGGCG TGCAAATGAA CACCACATCG 
GGTGGCGGGC TGTCCTCTGG GTTTCAACGG ATGTTAACGG GGCAGAACTT CTTTATTTCG 
GACTACTCTT TTGAAGGCGA GCCTGGAACC GTCGGCCACG TTGCGCTAGG TACTGATTTT 
CCTTCAAAAA TTGTTCGCCT AAATTTAGAA GAATACGGTG GGAAGATTGT TTGTCAAAAA 
GGTGCTCTTC TTTGCGCTTC ACATACAGTG GATATTCAAA TGGAGTACAG TAAAAATATG 
TCGACTGGAT TTTTTGGCGG CGAGGGCTTT GTTCTACAAG GACTTAGCGG CGAAGGCGAT 
GTCTTTGTCA AAGCCGGAGG AACTTTGATC CGTCGAGATC TGAAGGAAGG AGAGCAACTT 
CGTATCTCGT CGGGATGCCT GGTGGCATTT ACGAATGGAG TAGATTATGG TCTGTCATTT 
TTTGTGCTTG CTTTCATCTT TTTTTGTTGG CGTCGATTCA TCCTCATACG CAATGTATTC 
TTTGTAGACG TGCAAATGGT GAAAGGATTT GCGAACGTTT TTGCGGGTGG CGAAGGGCTC 
TTCATGACCA CATTGACTGG ACCAGGAGTG GTGTGGCTTC AAGGCCAACC GGCGCAACGA 
ATGATAAGTG AAATTGCCCG CCGTGTTCCG TCA 

 

Protein sequence

KVEGNESQIL TVALEPGQVL RAESGAMMYM TDGVQMNTTS GGGLSSGFQR MLTGQNFFIS 
DYSFEGEPGT VGHVALGTDF PSKIVRLNLE EYGGKIVCQK GALLCASHTV DIQMEYSKNM 
STGFFGGEGF VLQGLSGEGD VFVKAGGTLI RRDLKEGEQL RISSGCLVAF TNGVDYDVQM 
VKGFANVFAG GEGLFMTTLT GPGVVWLQGQ PAQRMISEIA RRVPS