Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50211 |
Symbol | |
ID | 7198884 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | + |
Start bp | 390926 |
End bp | 391886 |
Gene Length | 961 bp |
Protein Length | 307 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185026 |
Protein GI | 219129712 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.628277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACGA CACAATGTCC AGAACAGCTT TGGGACTACG CCATTACCTA CGTGGTAATT GTGCGTAATA ATACCGCTCG CAAAGCCTTA AATTGGCAAA CGCCATTAAC GGTTATGACA GGTGACACGA GCGATATTTC AGAATTGTTG GATTTCGAGT TCTACGAACC GGTACAATAT TTTGACAATC CTGAAATTAA ATTTCCACAA GCTAAGGCTA AAGTTGGTCG GTGGCTTGGT ATTGCAACAA ATGTTGGACA AGCTATGTGC TACTATGTCC TAACAGACAA AGGAACCGTG ATAGCGCGAT CCACAGTCAC ACCACTTCAC AAAGTTGATT CGACTGCTTT GCAAACCTCT CTTACAGCTT TTGATGCTAT GATAAGGGCT ATTTATCAGC CTACTGATTT TGCTCACAGC ACTAAAAAGC AAGCTGCCTC GTTACGACGA GATGAAGCAA TGAAGGTTGC CAGAAAAACT GGTGAACCTG AAGATCCAGG AGTCCGTAAT AGACATGTTC TGTATGACTT AAATGAGGGA GCCGACCATG ACCAAGTGGA ACCAGGACTA TCAGTTGATG ATTACTACGG TAACGACGAC GAAAAAGAGT CTGGTTCGTC GGATCTCCTT GTCGGCAGCG AAGTACTCCT TACTAAGGGA GGTATACAAC ATCTAGGCAA AGTCACCAAG CGTGATAAAA ATGGCCAGCC CAAGGGCTCA AACGAAACAA CCAATTATGT TGTTGAGTTC AATGATGGTA CTGAAGAGAT TCATGGATAC AATGCTCTGC TTGACGCTGT GTATAAGCAA GTCGATGATG ATGGTAATGA ATGGTATACT TTTGAAGATA TTGTTGACCA TCAAAGGCGC CCACGTGGCG GCCGAGGACG AACGAAAGGT TGGTTCCTCC GTGTTAAATG GGCCAATGGT GAATACACCT GGGAGCCTCT TACCTCTTTA A
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Protein sequence | METTQCPEQL WDYAITYVVI VRNNTARKAL NWQTPLTVMT GDTSDISELL DFEFYEPVQY FDNPEIKFPQ AKAKVGRWLG IATNVGQAMC YYVLTDKGTV IARSTVTPLH KVDSTALQTS LTAFDAMIRA IYQPTDFAHS TKKQAASLRR DEAMKVARKT GEPEDPGVRN RHVLYDLNEG ADHDQVEPGL SVDDYYGNDD EKESGSSDLL VGSEVLLTKG GIQHLGKVTK RDKNGQPKGS NETTNYVVEF NDGTEEIHGY NALLDAVYKQ ILLTIKGAHV AAEDERKVGS SVLNGPMVNT PGSLLPL
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