| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50211 |
|---|
| Symbol | |
|---|
| ID | 7198884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011695 |
|---|
| Strand | + |
|---|
| Start bp | 390926 |
|---|
| End bp | 391886 |
|---|
| Gene Length | 961 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185026 |
|---|
| Protein GI | 219129712 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.628277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGA CACAATGTCC AGAACAGCTT TGGGACTACG CCATTACCTA CGTGGTAATT
GTGCGTAATA ATACCGCTCG CAAAGCCTTA AATTGGCAAA CGCCATTAAC GGTTATGACA
GGTGACACGA GCGATATTTC AGAATTGTTG GATTTCGAGT TCTACGAACC GGTACAATAT
TTTGACAATC CTGAAATTAA ATTTCCACAA GCTAAGGCTA AAGTTGGTCG GTGGCTTGGT
ATTGCAACAA ATGTTGGACA AGCTATGTGC TACTATGTCC TAACAGACAA AGGAACCGTG
ATAGCGCGAT CCACAGTCAC ACCACTTCAC AAAGTTGATT CGACTGCTTT GCAAACCTCT
CTTACAGCTT TTGATGCTAT GATAAGGGCT ATTTATCAGC CTACTGATTT TGCTCACAGC
ACTAAAAAGC AAGCTGCCTC GTTACGACGA GATGAAGCAA TGAAGGTTGC CAGAAAAACT
GGTGAACCTG AAGATCCAGG AGTCCGTAAT AGACATGTTC TGTATGACTT AAATGAGGGA
GCCGACCATG ACCAAGTGGA ACCAGGACTA TCAGTTGATG ATTACTACGG TAACGACGAC
GAAAAAGAGT CTGGTTCGTC GGATCTCCTT GTCGGCAGCG AAGTACTCCT TACTAAGGGA
GGTATACAAC ATCTAGGCAA AGTCACCAAG CGTGATAAAA ATGGCCAGCC CAAGGGCTCA
AACGAAACAA CCAATTATGT TGTTGAGTTC AATGATGGTA CTGAAGAGAT TCATGGATAC
AATGCTCTGC TTGACGCTGT GTATAAGCAA GTCGATGATG ATGGTAATGA ATGGTATACT
TTTGAAGATA TTGTTGACCA TCAAAGGCGC CCACGTGGCG GCCGAGGACG AACGAAAGGT
TGGTTCCTCC GTGTTAAATG GGCCAATGGT GAATACACCT GGGAGCCTCT TACCTCTTTA
A
|
|---|
| Protein sequence | METTQCPEQL WDYAITYVVI VRNNTARKAL NWQTPLTVMT GDTSDISELL DFEFYEPVQY
FDNPEIKFPQ AKAKVGRWLG IATNVGQAMC YYVLTDKGTV IARSTVTPLH KVDSTALQTS
LTAFDAMIRA IYQPTDFAHS TKKQAASLRR DEAMKVARKT GEPEDPGVRN RHVLYDLNEG
ADHDQVEPGL SVDDYYGNDD EKESGSSDLL VGSEVLLTKG GIQHLGKVTK RDKNGQPKGS
NETTNYVVEF NDGTEEIHGY NALLDAVYKQ ILLTIKGAHV AAEDERKVGS SVLNGPMVNT
PGSLLPL
|
|---|
| |