Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50210 |
Symbol | |
ID | 7198883 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | - |
Start bp | 383095 |
End bp | 385081 |
Gene Length | 1987 bp |
Protein Length | 521 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185099 |
Protein GI | 219129864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.722754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTGCAACC ATTATTTTAA CTTCCACTTC TTCGACAAAC TTCAGAGTGT ATACCACGGG AGTCCGGACA AAATTAGCGA TGAATTTTAA ATCTCTTGCA TTCTTGACGA TTTTGCTCCC GTCGGCTTCG GCCAGAGTTG AGTCTCATCG CAAGCTGAAC AAGGTCCAAC AAGGTGAAGC AATTCCTGGT CAGTATGTGA TCGAACTCGA CTCCGGCGTT GGAGATTCGA GAGGATTTAC GGCAAGAGTA TTGCAGCGCT CCTTACGATC CAATGTTATT GAGAACTACG ATTTTGCCCT AAAAGGCTTT GCCGTGAAGG ATCTTCCAGA CGAGGTCCTG GACTTTCTAC TCAACCTTGA TGATGTTCTG TCCGTATCTG AAGATGGCTT TGTCGAAATG GACCAGGTGC AAGCCAGTCC AACTTGGGGT CTTGATGTCA TAGATGGCTC TGACGATGAC AAATATACCT ACAGTTTTAC TGGAAAAGGC GTCGACGCTT ACATCCTTGA TACTGGGATC GCCGCTCACA GCGATTTTGA GGGCCGTGTC GCTTCCTGTA TTTCCTTCGC CAATGAGGGT AAGCTGCAAG TATCTGTTTT GGCAGTTTCC AGTCAGAAGT GTGTACCTAA CCATATCCCT TATTTTTGGA AAAGCTTGCG GATCGGATGG CAGTGGCCAT GGCACTCATG TGGCTGGTAC TGTCGGTTCT AAAACCTACG GAGTTGCGAA AGAGGTCACA CTTCACGACG TCAAAGTACT CAACGCGATG GGTAGAGGAA CGTACAGTGG AGTGATTGCT GCCATCGATC ATATATCCAA GATCAAAAGA GAGAACACTA GCAAGAAGAT GGTTATTAAT ATGAGCCTTT CAGGTGGAAC AAATTCTGCT CTGGACAACG CCATCAATTC TGCTGCCAAT CTGGGAATCG TCGTCGTGGT AGCAGCTGGA AACGCGAACG CAGATGCTTG CAACTTTTCA CCATCTTCCG CGGCAGGTGC GCTTGCGGTC GGCGCAATGA ACGGCTCAAA TGGTCGTACC GTCTTCTCAA ACTGGGGCAG TTGCGTTGAT ATATTTGCCC CTGGTGTTGG TATCGTGTCA CTGTCGACTA CAGGAGGAAC TTCCACAAAG GCTGGGACTT CAATGGCATC CCCACACGTT GCCGGTGTGG CTGCATTGTA CCTCGAAGCT GGAAGGTCAG CATCAAATAT CCAGACTGAC GCTGTTACTG GTAAACTCTC CAACTTATCA GGCTCTCCCA ATAGGTTGGT AACCACCTCT CAACTTTCGA ACTCAATTCC TTCGACGAGG AGGCCGACCC AGGCCCCAAC TCCTGCCCCA ACGATGAGAC CCACTCGTAA ACCTACCGGT CACCCGACAC CCTTACCAAC ACTGTTGCCT TCAAACGCCC CCGCGGAAGA CATCGTTCCC AAAGTTCCCA CTATCGGCGC CAAACCTCTA ATTGACCCAG ATTCGTCGCT TCCCACAAAG ACTCCAGCTT CTTTTCCGAT CAGCACTCCC TTGCCACCAC CAACTCGCGC TCCGACCAAG GCACCCACTC AGGTTCCGCT TGTTCTACCA ACACCGTCTC CAGTGTCTTC ACAGTGCCAA GCTAGTGGCC AGGTGTGCAC CGCTTTCCAG CGATGCTGTA GCGGAATGAG ATGTCTTCGA TCCTGGTCAC CACAGCTTGG ACGACACCGA GCGTGTCGTG CTCGCTGGTG ATGATGGGCT TCCAAGACGG CCCTTGTCTT CCCCTACGGA TGGCGCAAAC TTGACTTTCG AAGTCATATA TGTAGTTCTG ATCCCCTCTT GCTGACGGCA CAATCCAGTC AATGAGAGCA GTCTATTGGA GATGCTTTTG CCTTTGCACT TAGACGGCTC TGCCAACACA GAAACCAGGA TTAATGTGAT GATAAAGAAG AAAAACTGTT GCCGCGGGCC AATTTGCATA ATTTGAATAC TTTATTCATG AGAACATTGT CATTTAT
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Protein sequence | MNFKSLAFLT ILLPSASARV ESHRKLNKVQ QGEAIPGQYV IELDSGVGDS RGFTARVLQR SLRSNVIENY DFALKGFAVK DLPDEVLDFL LNLDDVLSVS EDGFVEMDQV QASPTWGLDV IDGSDDDKYT YSFTGKGVDA YILDTGIAAH SDFEGRVASC ISFANEACGS DGSGHGTHVA GTVGSKTYGV AKEVTLHDVK VLNAMGRGTY SGVIAAIDHI SKIKRENTSK KMVINMSLSG GTNSALDNAI NSAANLGIVV VVAAGNANAD ACNFSPSSAA GALAVGAMNG SNGRTVFSNW GSCVDIFAPG VGIVSLSTTG GTSTKAGTSM ASPHVAGVAA LYLEAGRSAS NIQTDAVTGK LSNLSGSPNR LVTTSQLSNS IPSTRRPTQA PTPAPTMRPT RKPTGHPTPL PTLLPSNAPA EDIVPKVPTI GAKPLIDPDS SLPTKTPASF PISTPLPPPT RAPTKAPTQV PLVLPTPSPV SSQCQASGQV CTAFQRCCSG MRCLRSWSPQ LGRHRACRAR W
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