Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50206 |
Symbol | |
ID | 7198897 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | - |
Start bp | 372885 |
End bp | 373922 |
Gene Length | 1038 bp |
Protein Length | 223 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185096 |
Protein GI | 219129858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000459956 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAGTTCACAA GCAACAATCG ATGAGCCAGG CCCACAGCGA AGATGACTCT TTCACAGTCC TTTGCGCTGC TTGTTGCAGC AAACTTCGTT GGAGTTGCCT TCGCTCAGCA ACTGTCAGAG CATCGAAAGC TAAGCCGTAT CGTAGGGGGG CAAGCTATTC CTGGTCAGTA CATCGTTCAG CTGGATAAGC GTATTCCGGA TTCGAAAGGA TTTGCCACCA AGGTACTAAA ACGCGCGCTG AAGTCAAAGG TCATTAACAC TTACGACTAC GCGTTCAAGG GCTTTGCTGT CGCCAATTTA CCCGATACAG TTCTGTCTGT TTTGCTGAAT CTCAACGAAG TCCGCGATAT CTCCGAGGAC GGTGTCGTGA CAATTGACGC CATCCAGAGC AAACCAGTAT GGGGACTCGA TCACATCGAC GGCGTTGACG ATGACATGTA TGAGTATGCC TACACTGGTC TCGGCGTCGA CGCATACATT ATTGACACTG GAATTCTAGC CAGTCACGCG GATCTAGAAG GTCGCGTGGC TTCCTGCATC TCTTTCACCG GCGAAGGTAA GTCACTAATG CCCAACGCTC TTTGCCTTTT GCAAGGACCA TAGTTTTGTG AAGCCGCGCA GCAGCTAATA CCGTTTCATT GCATGTACAT CTCTTCTCTT TCTCTGGCTG CCACTCTTTC TTTGCAGCGT GTGGATTTGA TCTGCACGGA CACGGGACAC ACGTTGCTGG TACCGTCGGA TCCAAGACGT ACGGTGTAGC CAAGCAAGTA TCGCTTCATG ACGTCAAAGT CCTTAACGTC AATGGAACTG GATCATATGC CAACGTCATT GCTGCTGTAG ATCATGTAAC AAAGATCAAG CAGGAAAATA GTACAAGGAA GATTGTTATG AACCTGAGTC TCGGTGGTGG AATAAGCACT GCCCTAAACA CCGCCATCAA CTCGGCCGTT GACCAAGGAA TAGCTGTGGC GGTAGCGGCT GGTAATAACA ACCAAGATGC TTGTAATTAC TCGCCAGCCT CGGCATCGAA AGCGCTGA
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Protein sequence | MTLSQSFALL VAANFVGVAF AQQLSEHRKL SRIVGGQAIP GQYIVQLDKR IPDSKGFATK VLKRALKSKV INTYDYAFKG FAVANLPDTV LSVLLNLNEV RDISEDGVVT IDAIQSKPVW GLDHIDGVDD DMYEYAYTGL GVDAYIIDTG ILASHADLEG RVASCISFTG EACGFDLHGH GTHVAGTVGS KTYGVAKQVS LHDVKVLNVN GTGSYANPRH RKR
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