Gene PHATRDRAFT_50206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50206 
Symbol 
ID7198897 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp372885 
End bp373922 
Gene Length1038 bp 
Protein Length223 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185096 
Protein GI219129858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000459956 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAGTTCACAA GCAACAATCG ATGAGCCAGG CCCACAGCGA AGATGACTCT TTCACAGTCC 
TTTGCGCTGC TTGTTGCAGC AAACTTCGTT GGAGTTGCCT TCGCTCAGCA ACTGTCAGAG
CATCGAAAGC TAAGCCGTAT CGTAGGGGGG CAAGCTATTC CTGGTCAGTA CATCGTTCAG
CTGGATAAGC GTATTCCGGA TTCGAAAGGA TTTGCCACCA AGGTACTAAA ACGCGCGCTG
AAGTCAAAGG TCATTAACAC TTACGACTAC GCGTTCAAGG GCTTTGCTGT CGCCAATTTA
CCCGATACAG TTCTGTCTGT TTTGCTGAAT CTCAACGAAG TCCGCGATAT CTCCGAGGAC
GGTGTCGTGA CAATTGACGC CATCCAGAGC AAACCAGTAT GGGGACTCGA TCACATCGAC
GGCGTTGACG ATGACATGTA TGAGTATGCC TACACTGGTC TCGGCGTCGA CGCATACATT
ATTGACACTG GAATTCTAGC CAGTCACGCG GATCTAGAAG GTCGCGTGGC TTCCTGCATC
TCTTTCACCG GCGAAGGTAA GTCACTAATG CCCAACGCTC TTTGCCTTTT GCAAGGACCA
TAGTTTTGTG AAGCCGCGCA GCAGCTAATA CCGTTTCATT GCATGTACAT CTCTTCTCTT
TCTCTGGCTG CCACTCTTTC TTTGCAGCGT GTGGATTTGA TCTGCACGGA CACGGGACAC
ACGTTGCTGG TACCGTCGGA TCCAAGACGT ACGGTGTAGC CAAGCAAGTA TCGCTTCATG
ACGTCAAAGT CCTTAACGTC AATGGAACTG GATCATATGC CAACGTCATT GCTGCTGTAG
ATCATGTAAC AAAGATCAAG CAGGAAAATA GTACAAGGAA GATTGTTATG AACCTGAGTC
TCGGTGGTGG AATAAGCACT GCCCTAAACA CCGCCATCAA CTCGGCCGTT GACCAAGGAA
TAGCTGTGGC GGTAGCGGCT GGTAATAACA ACCAAGATGC TTGTAATTAC TCGCCAGCCT
CGGCATCGAA AGCGCTGA
 
Protein sequence
MTLSQSFALL VAANFVGVAF AQQLSEHRKL SRIVGGQAIP GQYIVQLDKR IPDSKGFATK 
VLKRALKSKV INTYDYAFKG FAVANLPDTV LSVLLNLNEV RDISEDGVVT IDAIQSKPVW
GLDHIDGVDD DMYEYAYTGL GVDAYIIDTG ILASHADLEG RVASCISFTG EACGFDLHGH
GTHVAGTVGS KTYGVAKQVS LHDVKVLNVN GTGSYANPRH RKR