| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50171 |
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| Symbol | |
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| ID | 7198948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011695 |
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| Strand | + |
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| Start bp | 261348 |
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| End bp | 263570 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185000 |
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| Protein GI | 219129658 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00469189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGATA GTGCATCCTC GGAAAGTTCC AAGGCTACTA TCGGCGTTAC TCTTAGCAAC
GCTATACCGA GTGATGCGTC GTCACGAGCC CGTTCCATTC TGGGCTCCAT GAAGGAGCAC
CGGGAAACGT TTTCACGGGT CGTACACCAT GGACATTCCA GCCATGGCGA TGATTTCCGT
ATGGCCTCAG CTGTGTCGTT GTCACCCAGT AATCCATTTT CGTCAAAGTC TGAAGATACC
ATGCTGACGA TTGCGCAGCA ACTAAACGAT TCCTTGAACG ATAGGCGGCA GCGACTGTCT
CGAGTTTCGG GTATCGATGT CGGTAACAAA ACAACTACAG TCGACAGCGC CGCTGGAGAG
AACGTGCGTA CAGCTCCGAC ATCCCCAGTG AGTCAACGTT CGGGACACAC GGTTGCAACG
GAAGAATCCA CGGTGGCAAC GGGAACTTCG TCACCTGGAC AGTCGTCCTT CGATCCGTCG
TATGCGACAA CCCAGCCTCC CGATTCTCCG ACACAACAGC AGCAGAGACT TGGAATAGTT
CAGTCTCGGG AACCCGTTGC GATTGCCTCC ACTGCGCAAT TGCCATCGAA CGAGGAAGTT
GAGAATCCTG ATATTCTAGA GAATGCGGAC GTCCACGAGA AACATGGCGG TTCCGACAGC
AAGGCAGCTT GTGAATCGGT ATCTACCGTC GACGTTAGCT TCGGTCCGGA GACGCAGTTT
CGGCATGTTC GCAGCTCCAA GTCGTTTGGT GACAGTGCGC TAGAAAGTCG TAATGCTTCC
GTTCCTCGAT CCATCATCAC AACAAGCTCC TCGTTTGGTC ATTTTTCATT TTCATCGTCT
CCGTATGTAA CGGACAAGAC TACATCCAAG CAGGAGACTG ATTTGCGTTT CTCTCCTTTG
CCCCGGCTGT GTCATATACT TCCTGCGTCT ATACCCCCAG TGCCATTGGA GGATCCACTT
TGGGCAGCAG TCGATGATTG TGCGTCTCCC TTGCTGCGTG GATCCAATCG AACGAACGAC
AATTTGGATA ACACCGCTGG ACAAACGGGC AATATTCAAG GCTCATATGC CACGCTCTAC
CCTAATCAAA TTGAAGCTGA TGCTTGTATT GATGAAATAC ACTCAGCTTC GCAGCGCTTG
CAATACGCAT CAGATGATGA CAATCATCCG GCGCAAGGTG AAGCCGAGTA CTCGCAGCAA
TCGGCAGCCC GAACGTTACG CAGACCACAC GAACTCGAAA AGAACGTATG TGATTCGACG
TCTCCGGATT ACCGAGAATT GCTCAACATT TCAGTCGTTG AAGAGTATGC TGACCGGCGC
CGACTTCTCA AAGCCTTGCG TACCGACGAC CGTCGACTAA AACAAGCTCC AACGGAGCTC
ACCGATGCCT CCAACGCTGA AGAAGCAACG TCAAATTCGG ATGCGCATGG AATCGGAGGG
AGTTCGGAAG AAGACGATCC TTTTAGCAGT GAAGATTCGT CGCTGGATTG TACTACCGAC
TCCGATACAT CGGGTTGGGT CAGTAGTAGC GATTCAATTA ACAGCGCGTT ATCGACTCGA
GTCGGCAAGC GATCAGTCGA CTTTTCCTCA CGGGAAGGAA AGTGCAGAGC AGAATTGAAA
GCGGACTGCG CATCCGCCAA CGTTTCGACA TCCCTGCTAC TATCTTCTAG TAACGACACG
GCACAAAAAG TACCGCGGTC GGAACGGTTA ATTTGTCAAG GTGGACTGTT CTGGATAGCT
TTACGATCCG ATTGGGATCA GTCTCATCCT GATCGAATTC AAACACTTCC CAAACCGAGC
TCGGCTGACG TTCTTCACCT CTCGTCAGAT CTTCGTTGCG GCACGCAAGG ATCCATGTAT
GACCTCTGTC TGAAATCTGG CTTCAACACG AATGCCAAAA CATGGGAACC TGTTGATTAC
GGCACGCAAG GATCTATATA TGACCTCTGC CTGAAATCCG GCTTTAGTAC GAATGCGAAA
GCAACGGAAC CTGCTGAAAT TCGAGAAGAG CAATTCAACG AAGCACGAGG TGGTCTTTGG
TATTTGGCTA GTCGCTCTCC TCTCAGTAGG GACCGTCGGC TAGAGCCATA TTCGGTTAAA
GGAAAACCTC GGACAAGACC TCACGGCGCA ATCAAAATTC AGTCTGACTA CAAAACAGAT
CGAGAGTGTG GAGCGAAAGG CACGCTGCAT CTATGCATGA CGTTGCAGCT ACAGGTGAAT
TAA
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| Protein sequence | MKDSASSESS KATIGVTLSN AIPSDASSRA RSILGSMKEH RETFSRVVHH GHSSHGDDFR
MASAVSLSPS NPFSSKSEDT MLTIAQQLND SLNDRRQRLS RVSGIDVGNK TTTVDSAAGE
NVRTAPTSPV SQRSGHTVAT EESTVATGTS SPGQSSFDPS YATTQPPDSP TQQQQRLGIV
QSREPVAIAS TAQLPSNEEV ENPDILENAD VHEKHGGSDS KAACESVSTV DVSFGPETQF
RHVRSSKSFG DSALESRNAS VPRSIITTSS SFGHFSFSSS PYVTDKTTSK QETDLRFSPL
PRLCHILPAS IPPVPLEDPL WAAVDDCASP LLRGSNRTND NLDNTAGQTG NIQGSYATLY
PNQIEADACI DEIHSASQRL QYASDDDNHP AQGEAEYSQQ SAARTLRRPH ELEKNVCDST
SPDYRELLNI SVVEEYADRR RLLKALRTDD RRLKQAPTEL TDASNAEEAT SNSDAHGIGG
SSEEDDPFSS EDSSLDCTTD SDTSGWVSSS DSINSALSTR VGKRSVDFSS REGKCRAELK
ADCASANVST SLLLSSSNDT AQKVPRSERL ICQGGLFWIA LRSDWDQSHP DRIQTLPKPS
SADVLHLSSD LRCGTQGSMY DLCLKSGFNT NAKTWEPVDY GTQGSIYDLC LKSGFSTNAK
ATEPAEIREE QFNEARGGLW YLASRSPLSR DRRLEPYSVK GKPRTRPHGA IKIQSDYKTD
RECGAKGTLH LCMTLQLQVN
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