Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50164 |
Symbol | |
ID | 7198858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | - |
Start bp | 241296 |
End bp | 244122 |
Gene Length | 2827 bp |
Protein Length | 741 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185072 |
Protein GI | 219129808 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00402941 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGTTTTTTGC GAAAATGCCC ATTTTCTCAT TGCTTGCATT CCTTCTTTTG CTGGTCTCCG CCAGCATTGC TACTGTCACC GGTCAAGACA TCGGAAACAA CACCGATGTC TCATGCGTGA GACGGTGGTT TGCCACTGTT GAAGAGGCTG TCCCTATGTC GTCCCCTCAA CTGGTTGAGC TCGTTTTGCT AAATCTGGGC ATGAGTAACA GTAAGCTAGT GAGGATGCAC CTGGGAACAT TATTGACTGA GCCAACCCCA ATTGTCTCCA TGACCTCTAG GTCTAGTGAG TGTCTCAAAT CAAATGTTCC TATGTCCTCC ATCTGTGATG TATTGGACGG GCCCTATGTT GCCAGCTTCG GAGCCAACAG TAGCGACACC TCGCAGAAAA ACGTGTGGGA ATATCTTGTC AATGATGCCA TTGTTTACGA TAGAATCACA AGCGCTTCTT TGTCCAATTT TGCGTTGCTT TCTGAGCTTC TTGACCACTT TAAATCCCGT CGTGAAGAAG TTGAAGCTCA TAACAAAGCC TTCTTCCCAG GTCCGAGGGG CACCTTTGTC CGTGAGAAGC TACTTGGTAT TTCAAAAAGT ATTGAAATTT TGACCACTAC TCTTGGTGGA AGTGTGCCCA ACCCGGGATT TCAACAAAGT CTGCAAACCA ACATATTTGA GGCTGTCAAG CTTGATGCTA AAACTGGTCA TGACAACAAT TCTAGAGTTG GAGTTGCGTT GGCCAGTACT ATCAAGTTTG GTCCTAGTGT GGACAGCCAT CAGTTCATGT ACAGACTAGG AAAGGAGTGG GTAGATGCCT ACATTGCCTG GAACACTGCA TTTGTAATTG GGGCACTACC TGTTAGCAAA ATGGTTAAGC TTCTGATACC ATCTGTCACA TGTAGTGCAT CTCAGTCTAT TCAGGGAGAG GGCTTCATTG CTGCTCGCAT CATATCTCTT TCACTTGCTC TCTATGAGCT TACAGCTCTC CCAGATCAGG TGTACATGTC TTTGAGTATT GACTCAAAGA AGCTTGATGA CATCAATGCC TTCCTCCTGT CAGAAAGGGA CAACGTTGAC TTCAACACAG AGCTGAGATA CCCATTGGTT GAGGCAATGG GACAAAGCAA CTTGCAATAC AGTATCCTAA CAAGTCCCTC AGTGACAGAA GTTGAAGAGA TGTTGTACAA GCTTTGTGGC AACCACTGTC ACAATGGCTC CTGGCAAGTG ACCGACACAG TGCCAATTGC TCTATTGGAT GATGAAGACT TCCAGGTCTA TGTGGCACTT GTGCTGTGGA TGACAGCGCT TTTGGCTGGT TTGGGCTGTG AGTTGCTGTT TTGGTTCAAG CTGATTGACC AAGGTGGCTG GTCAGAGGAA CAAGAGTCAC TGTGGTGGGT TGCCCAGTTC TTCTTCCCCT TGTGGGCATC AACATGTCTT GGATTGGCCT TGCAGAAAAA CTACTTGGCA CTTCCTTTCC TGGTTTTTGG TCTATTCAAG TTTGGAATGC CAGAAACACT GTCATACATG TACACTGCCT TGTACCAACA ATCCAAGTCC ACATTAGCAC GAATTGGGGA CTTTTTGAAC TCAACTGGAA CTGTGCTCCA TCATTCATCA GCAATATTGC TGATTACTTT ACTGCTCTCT GGCGTTGTCC CTCCCAGTTG TCATATTGTT GCCCCCATTT TACTGTTAAC CATGCAGCAC TGGTTTGTTT TGGTCAAATA CATGAATTTT TGGGCCTACG CAGCACTCGA AATAGTGCTT GAGATATGGT TTGAGTGGGT TCTTCTCTCA GAGTTCCAGT ACTTGCACTC AGTTCATTGG ACACTTATAG TGGCTGGATT GGGAATGCTT GTTGCCCATT GGATTTACCT GGCTGCTGCT GCTTTGGAGC TACTTGCCTT ACAGTCTGGC AGGGATTGGG ACACATCAAG AAAGGATGAG ATGTTTCTTG ATGATACCAC CACTGCTGTT GAAGCCACTT CCCAAGCTTT AGTCAGCAAC CTCAAGAAAG GTGAAGGGAC TTGCAAACGA AAAAATGGTG TTGCCAGTGT CTCTTTTGAT AGCAAAGCCA AGTCTTGGTC AGATGACGTG CAGATTCACT GTGAAAGTGA AACTAGACCA ACTCTTGCAT CAGGATCTAG AAGAATGCTA CTTGGAAAGA CTGGATCTTC AAAGAGGCTT CTTAGTGTTA AGGAAATGGT TCAAATCTCC GTGAAAGATT TGCTATATCT TCCGCATTGA GTTGTCGGGA ATTCATTTCA ACTGCCCAGA TTGCTACTCT GGTGCACAGT CAAGATAAAG AAAAACAGGA ATCTGCTCAA CACAAGCCCA CTGCCTCGTC CTCAGACGAT CTTGGCCATC GAATTGATAT TGCCCACCGT GACAATTCTG GAGACAACAG TTCATCTGTT AAAGAAAGAA TGTGGTTTGT GGTTGTGAGC CTCTTTCTAG TCTTTGTTCT TCTCAATGCG TTGCTGGTTT TCATTGTGGT GCTGGTGATC AAGAACTATC CTGACTACAA AAATGAAAAG TTTTTCTCCG ATTTTGACAA TCCATACAAC GACATTTTGA AAGACACCAT CCCCTACATT CAGAATTGGT ATCGCAACCT TGATCATACC CAACCCTTAT TGTCAGAGGG GGGGATCTAG TAGCTCATTG GTGTATGCCT TTTGCAGAAC ACCTTTGCTT GATTGTCGGT TGTTTTGAGA ATTGATTGAA GAGGAGAAAA ACTGTATGGA AGTCCAACCG GCATTAGCAT AAGGCAATGA AAGAGTCTTT AGAACAGCAG CTAGAATAAT TTATTTATTT CAGGATTTAT GTTAGTG
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Protein sequence | MPIFSLLAFL LLLVSASIAT VTGQDIGNNT DVSCVRRWFA TVEEAVPMSS PQLVELVLLN LGMSNSKLVR MHLGTLLTEP TPIVSMTSRS SECLKSNVPM SSICDVLDGP YVASFGANSS DTSQKNVWEY LVNDAIVYDR ITSASLSNFA LLSELLDHFK SRREEVEAHN KAFFPGPRGT FVREKLLGIS KSIEILTTTL GGSVPNPGFQ QSLQTNIFEA VKLDAKTGHD NNSRVGVALA STIKFGPSVD SHQFMYRLGK EWVDAYIAWN TAFVIGALPV SKMVKLLIPS VTCSASQSIQ GEGFIAARII SLSLALYELT ALPDQVYMSL SIDSKKLDDI NAFLLSERDN VDFNTELRYP LVEAMGQSNL QYSILTSPSV TEVEEMLYKL CGNHCHNGSW QVTDTVPIAL LDDEDFQVYV ALVLWMTALL AGLGCELLFW FKLIDQGGWS EEQESLWWVA QFFFPLWAST CLGLALQKNY LALPFLVFGL FKFGMPETLS YMYTALYQQS KSTLARIGDF LNSTGTVLHH SSAILLITLL LSGVVPPSCH IVAPILLLTM QHWFVLVKYM NFWAYAALEI VLEIWFEWVL LSEFQYLHSV HWTLIVAGLG MLVAHWIYLA AAALELLALQ SGRDWDTSRK DEMFLDDTTT AVEATSQALV SNLKKGEGTC KRKNGVASVS FDSKAKSWSD DVQIHCESET RPTLASGSRR MLLGKTGSSK RLLSVKEMVQ ISVKDLLYLP H
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