Gene PHATRDRAFT_50157 details

Gene Information

• Locus tag: PHATRDRAFT_50157
• ID: 7198941
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: +
• Start bp: 216186
• End bp: 221538
• Gene Length: 5353 bp
• Protein Length: 1494 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002184992
• Protein GI: 219129641

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGATCGAATC AGCTTTCTAG CGGGTTGGCT CATTGAAAGT CCGTTCGAGA GTGAAACTAT 
CTCGCATTAT ATTTGCCAGT GTGTAGCTTT TGTCCTTCCT TTGTCGAGCC CAGCCCACGA 
ACTGTTCGTC CGGTTTCGAA AATTCGAAAC CAAAACAACC TAAAGACATT TGTATCCGAA 
CCTGAACACC ATGTCGTCCT ACTTTCGTCA ACAAGCTCCG GCTCCACTCC GCACCGTGCA 
TCGCGACTAC GAGTATACGT CAGCAATCAA CGGAACAACT CCCACACCGA CGTCGGCTTC 
GGCGCATGGT GTAGTCCAGA ACCAGTTTTA CCGCACCAGG GCGCCGCCTC CATCGCGGTC 
TCCCCGGAAC GCTCGTGTCG AACCCGACGT AGACGCCGAG GAAGCCTTGC TAGATCACGC 
TCATTTACGA GAGCTGCACG AAGAGGCGGA GAAAATGAAA GCACTTGGGA ACAAACACAT 
GGCAGCACAG GTACGTCCCT CGCAAGCTCC AGATGCCAGT CTTGAGGCGC GCGCCATTCC 
CAGCACTGGT TGCACTCGCT CACGTCCCTA CTCTTTATTT TTCTTCCGTT GTTGACAGGA 
ATATGCCAGA GCCTACAATG CCTATTCGGC GGCGCTTCAG CTCGCTCCGG TCGGACCCTC 
TTCCCACGTG TTTTTGTCGA ATCGAGCCGC CGCCTTATTG AGTATGAAAC GGTACGAGGC 
CGCGGCCACG GACGCAAAAC GAGCCATAGT CCTGGCTCCA ACTTTCGGCA AGGCCCACGC 
TCGCCTGGGA CAGGCTCTCT ACTTTTTGAA AGACTACTAG GCCGCGGTCG AAGCCTACGA 
AGAAGCGGTA GCCTACGAAC CCGACAACGC CACCACGCTC ACGTATTTAG AAAAGGCCAG 
GGCCAAAGGT GAGCGCTACA ACACTCGAGC CCGCGGCGAC GACGGCTCCG TGGGGGGCGA 
TGCGTCGACT GCCTACTCCA TACAAAATAG TGTTGCTACG GATCACTACC AAAAGGGCGT 
CGTCGAGTCT GGTTATAGAG GAATTACCAA TCAATCCGTT TTGAACGCAG CCGTCAAGTC 
GCCCAGGGAG AGAGCCACCG GGTCGTATCG TGCCAGTCTT TCGCCATCGT ACCAGCAGTA 
CGACATGAAC GAAGATGACC CTGACTTTGA TGAAGCCCTG CGCATTCAAC AGCGCGCCGC 
TAAATTCCTC ACCAACAAGG CGTACAGGGC AGCTATTGAA GAATACACGG CGGCGTTGTT 
CTTGGTTCCT GACGACCCCA ACCTTTCACC AGAATTGCAT TTGGGTCGAG CGCACGCCTT 
GAACGGATCA CGACGGCACG AATCCGCCAA AAACGACGCC CGTATGGCTA TTCGGCTTAA 
CCCTCAGCCC GCTGCCTTTT CGACAATGGC CAAGTCACTA TTTTACATGA AAGACTATCG 
AGGTGCCGTT GAGGCCTTTG AGGAATGCGT CAGGCATCTA CCTGCAGGCG AGACCCTTGG 
CATGTTTGAC AAAGCGTATT TACAAAAAGC CCAGGCTGCT CTCGATGAAG AAGAATTCAG 
TTTGCGGATG GCGGGAACTC CAACGCGCCA GCCAAAAACG CCTATTCCCA AACTCCCCCC 
ACCCCGTTTT GTTCCACGGG AACAAGCCAT GCAGTCATCG CCACAAGTGC CTCCCATGCC 
CAAACAGTGG CCTCAGCAAT CGTCGCTCGC CCCTTCCACC CTGCGTTGTG GACCGGAACG 
GCAGGTTTTC TTCTTGTCGG AAGGTCTAGG CATCAAACTG AACCGCGGAC CCGACGGTAT 
TGTACGGGTC TTGTCGGTGA CTTCGAATAC TCCAGCGGCT CCGGTTGCCC GTAGAGGCAT 
TATTGAAGCA GGTGACGTGG TTCGTGAAGC CGCTGGCGTC GACATTCGTC GGCCTATTAC 
AAACATTATG TGGGGCGACA CGGTCGCACT CATCAAAATG GCAGCCCGGC CAATTGTGCT 
CGTCGTTGCG AAAGAAGTCT CCAAAGTGCC TTTGTCGGTA TTGGAAGAAC AAATGAAGGC 
CTTGTCGCCT TTTGGATCGA CATCAACAAA ATTTGGTGGG AACCACGTTT ACCGTCCGTC 
GAAATCGAGT GGCGACGAGA CAGTCCGGTA TGTCTTGGAA GAATCCATGG GTACGCCAGT 
AAGTATGGAG TGTTCCTGTT TCTTGTGCTT TGTGGATACA GTAGGACGAC TCCAGTTTCG 
CTGACGTCTT TGTTGTTTCA CTCAGAGTAG CTAGCTGCTG GTCTGCCAGG TGAGGATATA 
GTAGACGAGG AGGGCACGGG TGTAGAGATA ACTGAGGCTG GACCGTTGGA AGAAGAAGAT 
ATCGAAAGCA ATGATGAGGA AGTTGAATCC GACTCCGCTT CGGACGTAGC TGTTCTAGCC 
GGCGAACCTG AAAAAGAAGA CGTTAGTGAT ACTGTGGATG CTTTATTGGA CGAATTAGAG 
AAGATGGAAG TGAGAAAAAG TAACTCGGAT GACGTGGAAG GCTCTGGTAC ACGCCGCATG 
TCAGCCGCAG ATTATGAGCT GGAAATGCTG TGCACCGAGA TTGAAGCGAC CAACTCGGAA 
AGGAAGTCAG TCGAATCACC TCCGACAGTG GATGCAATGC CTCTTGATGG CGATGACGTG 
CCTCCGGAGC GTGTGATTAC TGTCAAGCCA GGCAGATGAG GGGGAAGGAA ATGGGGGAGC 
TGCCAAGAGC CTATCTTTAC GTGATCGAGA AGAGCAAATG GTTGGAGGGG AGATTCTTTT 
TGGCTCGGAA GCAAATTTGT CTACCGGGAG CTGGGACAAT TTGCGTTGGA TGTCCTACTC 
GGGGTCCCGC AAAATACGAT TTTGTCAGAT GATTTATCGC CTTCTCACTC CAGAAAAGAA 
GAACATGTTT TGGGTGACAT CGGGTAGAGC ATATGAGAAG CGGGGGCTAG CCATTTATGA 
AGAGCCGCGA TTAATTCTGG TTCTGCGGAG GGTGGTAGAT ATGCAGGAGC TCCGACTACT 
TCTAGGTCTA CCTGACATCG CCGAAATAGA CAACCCAGAC GTTGCTTTAA CGCGTTATTG 
GGTTGTCGAA AGTGCTGTGG ACCCTGCGGT CAGCAGGCTA CGTCTGTCTC CTCTCACAAC 
TCCAACATCA TGGGGAAGCG AACAAGCGGA CACCAGGGAG AAATCCTGTT TTGAACTTTT 
GTCGCCGGCG GAATCGATCA TGCTCTCGGC CGTACGAGTA CGTGAAGGAA TCAAGAAGAA 
AGAACGATCT TTCGTTGACA GTGGTGCTTT CCTGGAAACG ACTGCAGTCG AAACCGCTCT 
CACAAAAGCT CTTTGTGATG CTAACGACCA CGCCGGTAAA ATTGGATCTC TGGATGTAGA 
CATGACGTGG AAGCACCAGG TTATTTTGGG AACGCTTCAC TCGATTGTCC TCTCCGGAAA 
TCTTAAAGGA TTGGAGGAGG CAATACAACG ATTGCGAGTT TCCGTGAAAG ATGGTAATGG 
GTCATCAAAA TTTCTTCCAA CTCGTGTAGT CGACCCGCTT GATGAGAACG GCCGCACTCC 
TTTGTACTAT GCTTGTACTT GTCGCATGAG CACTGCTGTA GCATGTCTTA TTAACTCTGG 
GGCAAGGATA AACGTCAAGA CAACGTCGGG CGGTATGGCT TTGAGTCACA TTTGTGCATC 
AAACCTCGAC GATAAGAGTC TTTCGATTGT GCTTTCGGCG ACACGTCCCT CTAGGCTTGA 
TCCGAACGAG CTTGACACCA TGGGAAGAAC GCCGATGTAT GTAGCCCTCG TCAACGGTCG 
TTCAGTGGCC GGAACACGAG ATGCCCGGGC TCTGAGTCGA TGTCTTGTCG CTTTGGCAGC 
ATGGGGTGGT CGGATAATTG TGACCGAAAC GACTTCATTA GCAAACCCGG TGAAAGTGTT 
AGCATCTGAG TGGCGATCAG AGGACCTTTC TGTACTTCTG GATCATATTG GTTTCCGGTA 
TCCTCTTCGG AAGCCACAAT CCTCGGATCT ATCACCGATC GCGCTGTCTC TGGGTGCATT 
CTATAACTTT CCAATACACA GTGCGTTGAT TTCTCTGCAT GGTCAGTTGG AAGCAGTAAC 
TTGTCGAGAC GAAGCTTCTT CGTATACTGG CGTTCAGCGA ACAATCCGAA CTCTCTTACT 
GAAAAGTTTC GAGCCCAATG AGCGCTTGGA TTTTTGTCAA TCAACGATGA CCGCTGCTCC 
TGAGCTGGCA AATTTCGCTG GTTTTACGCC CCTCCAAATT CTCGCGGCTT CCGCTCTGCA 
GCTGGACGCG GTTGAGGCGC AGATCGACGA CGACATCTAC CTTAGTCTTG TTGCTTTGCT 
CGCTGAAGTT GGTGAGCTGC TGGTGAAGAA CGGGGCTCGA ATATCTCTTG ATGCGCCATC 
GTTTAAGAGA ATACGTCGAA ATGCGTCTAC CGAGGGTGTT ACTACTAGCA AGAGTCAAAA 
GGGCGATTCA GTTGTGGACG TTTATCGCTC ATCTTTGAAA ATTGATTCGA ATAAGAAAAT 
AACTAAGATG CTGGGAGGCG CAGAAAGACT CTCACGGGCC CGCAAAGAGT TTATGCAGCT 
AACAGCGGTG AATGCTTCGC CGGATATGAC CGTCAATTTA AACCTTGGTG ATGCTTTGCC 
TCTGGAAGAT ACCAGTGAAG CTGGTGGTAA TAACGAAAAG TCTTGCGCCA TTTGCTGGGT 
TGTTTTCGGC GCTCTCATGA ATCGCAAGCA CAAGTGTCGA GTCTCTCGAC GTTATATCTG 
CGACGAATGT TCCACCAAAC GAATTCTTTG CGATGGTAAG GAATACCGAT TAAGTGACGG 
TCAATTTGCT TTGGCCAGAG CAGACGCCGA CGAAGTTGCC AACGAGCGTG AAGCTGACTT 
AAATGCGAGA GCGCGCGATA CGTCCATGGA GAGTCGGGTA CCGTTTGCTC AAGGATCTGA 
GAGATTGCCG GAGAAGAAGC CTGCCGCCCG AAAGTCTTTA AAACAACTTC GTCTCGAAAG 
GCTTGAAGCG GAGGGGGAAG CAGATCGTAA TTCGTTGTTT GGGGGAATCA TGGGATCCGC 
AGCCAAATTA TTTGGTACTG AAGGAGAACC GCAAACGCCG ACTCAATCGG ACGAAGTGAA 
GGGGTTAAGC GATTCGTTAG GACAAACACG TAACGCGTTG TTGGAACGCG GCGACAAATT 
AGCGACACTG GACGACAAAT CAGCAAAAAT GGTGGACGCA AGCGCGGACT TTGCTCGAAT 
GGCGAAAGAG CTTCGCAAAA AGTCGGAAAA ATCATGGTTC GGCTAATGTG TCAGTGGCAA 
ACGTGTGAAG TATGTGAACT TTCTGTAAGC ATTCTATAGT AGACCATTGC ACATTTATAT 
AGCTTCGAAA CGT 

 

Protein sequence

MSSYFRQQAP APLRTVHRDY EYTSAINGTT PTPTSASAHG VVQNQFYRTR APPPSRSPRN 
ARVEPDVDAE EALLDHAHLR ELHEEAEKMK ALGNKHMAAQ EYARAYNAYS AALQLAPVGP 
SSHVFLSNRA AALLSMKRYE AAATDAKRAI AAVEAYEEAV AYEPDNATTL TYLEKARAKG 
ERYNTRARGD DGSVGGDAST AYSIQNSVAT DHYQKGVVES GYRGITNQSV LNAAVKSPRE 
RATGSYRASL SPSYQQYDMN EDDPDFDEAL RIQQRAAKFL TNKAYRAAIE EYTAALFLVP 
DDPNLSPELH LGRAHALNGS RRHESAKNDA RMAIRLNPQP AAFSTMAKSL FYMKDYRGAV 
EAFEECVRHL PAGETLGMFD KAYLQKAQAA LDEEEFSLRM AGTPTRQPKT PIPKLPPPRF 
VPREQAMQSS PQVPPMPKQW PQQSSLAPST LRCGPERQVF FLSEGLGIKL NRGPDGIVRV 
LSVTSNTPAA PVARRGIIEA GDVVREAAGV DIRRPITNIM WGDTVALIKM AARPIVLVVA 
KEVSKVPLSV LEEQMKALSP FGSTSTKFGG NHVYRPSKSS GDETVRYVLE ESMGTPLAAG 
LPGEDIVDEE GTGVEITEAG PLEEEDIESN DEEVESDSAS DVAVLAGEPE KEDVSDTVDA 
LLDELEKMEV RKSNSDDVEG SGTRRMSAAD YELEMLCTEI EATNSERKSV ESPPTVDAMP 
LDGDDVPPER ADEGEGNGGA AKSLSLRDRE EQMVGGEILF GSEANLSTGS WDNLRWMSYS 
GSRKIRFCQM IYRLLTPEKK NMFWVTSGRA YEKRGLAIYE EPRLILVLRR VVDMQELRLL 
LGLPDIAEID NPDVALTRYW VVESAVDPAV SRLRLSPLTT PTSWGSEQAD TREKSCFELL 
SPAESIMLSA VRVREGIKKK ERSFVDSGAF LETTAVETAL TKALCDANDH AGKIGSLDVD 
MTWKHQVILG TLHSIVLSGN LKGLEEAIQR LRVSVKDGNG SSKFLPTRVV DPLDENGRTP 
LYYACTCRMS TAVACLINSG ARINVKTTSG GMALSHICAS NLDDKSLSIV LSATRPSRLD 
PNELDTMGRT PMYVALVNGR SVAGTRDARA LSRCLVALAA WGGRIIVTET TSLANPVKVL 
ASEWRSEDLS VLLDHIGFRY PLRKPQSSDL SPIALSLGAF YNFPIHSALI SLHGQLEAVT 
CRDEASSYTG VQRTIRTLLL KSFEPNERLD FCQSTMTAAP ELANFAGFTP LQILAASALQ 
LDAVEAQIDD DIYLSLVALL AEVGELLVKN GARISLDAPS FKRIRRNAST EGVTTSKSQK 
GDSVVDVYRS SLKIDSNKKI TKMLGGAERL SRARKEFMQL TAVNASPDMT VNLNLGDALP 
LEDTSEAGGN NEKSCAICWV VFGALMNRKH KCRVSRRYIC DECSTKRILC DGKEYRLSDG 
QFALARADAD EVANERLKRR GKQIVIRCLG ESWDPQPNYL VLKENRKRRL NRTK