Gene PHATRDRAFT_50150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50150 
Symbol 
ID7198938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp198421 
End bp199458 
Gene Length1038 bp 
Protein Length248 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185066 
Protein GI219129795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCG ATAGCACACC AGTGTCAAGA TTACCCATGG CGACGAAAGA CTCTACAGGT 
TGTCCTTCGT TGAGCGAGTA CGAAGTTATT CGGGCTCGAA ATATTGAAAG GAACAATTCA
CGGTTGAGAT CTCTGGGTTT AATTTCTGCT AATGAACAAC AGGAATCAAA CGACGCAGCT
TGGAAACGAC GTCCTCACAT TCCAGACGAG GCAATACTGG CTGAAACCGA ACAACTCCGC
GAAGACGAAG ACTTCAAAAC CTCTTCAGAT AATCGAAAGC GCAGGCGAAC TCAAGAGGGT
CCGTTTCCTT ACAGATCATC AATGCGGCTC AAGGGCCTCG AGCCTGACGG TGGCACCGCG
AATATAACCT CCGAGCTGAC GTTGATTAAG TCACAGTCAG TTTCCACCAT CGAGGTGAAG
GAACGACGCC GCATTCTTAT CGAAGAATGC CGGAAGGAGC GACAAAAGGC AGCACTTATA
TTTGCCCAAC TAGGTATTGC TCAAGCAGCA AAAGAAAATC CTACTGCTAC ATACGAGCAC
TGTTTGATGC GGGTCCGTAC CATGACGGAA AAGGCACTGG CCAATCGTGT AAAAGCAATC
GAACGGGCTG CGGGGAAGCA CTGTGTTGTC AAGATGGCAA TCTTCAAATC CTGCTTACAA
GACGAAGGAA AATGGGATCT GGCTGCTTTG GCGCGGGATG CTTTGGAGCG CTTGAAAGCA
ATGCTGCCAC CGCCAACGGA ATCATAGCTG AATGCATATC CATCCAAGAA TCCCACAGTA
TTCTCAAGGA CAGCTTGTGT AGGGTTCCGC ATATTCTCGG TCAGAAGCTA TCCCATCGGA
CCTTGGCGAC CAAACCGAGT TTTCAAAAGG GCATCGCAAA GTATCCAGCT CCAGTATTGC
TGTTGATTGG ACAAGCGACA GCACAGTCCT GTTTTGTAGA GAGGATCGGA AAGCTTGACT
GTAAACTCAA CCCTAGAGCT ATATGCTATC TGACTTTTAA TGATAGATAT TTACAATTAG
TGCGCTGTAG AAACGGTG
 
Protein sequence
MSIDSTPVSR LPMATKDSTG CPSLSEYEVI RARNIERNNS RLRSLGLISA NEQQESNDAA 
WKRRPHIPDE AILAETEQLR EDEDFKTSSD NRKRRRTQEG PFPYRSSMRL KGLEPDGGTA
NITSELTLIK SQSVSTIEVK ERRRILIEEC RKERQKAALI FAQLGIAQAA KENPTATYEH
CLMRVRTMTE KALANRVKAI ERAAGKHCVV KMAIFKSCLQ DEGKWDLAAL ARDALERLKA
MLPPPTES