| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50138 |
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| Symbol | |
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| ID | 7198842 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011695 |
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| Strand | - |
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| Start bp | 162501 |
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| End bp | 167882 |
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| Gene Length | 5382 bp |
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| Protein Length | 1699 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185061 |
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| Protein GI | 219129785 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA CGCCCAAGCT GATGGTGGAC CCGTTCACCG AGGCCGTCGA ACGCATCGTG
CTCCGCGTCA CCATGGTCGA AGGCCGAGAA GGCGACTACG CGTACAAAGG CACCGCAGTA
GATGGACCCT TGCTGCCACA AGAACTTGCG GAATTATCCC TGCTCTGTAC ACGCCAAATG
GCACTGGAGG GAGCAAAAAC TGATGCGCAA GGGTTTGCCG CCGTCGAAGT GGAACAGCTT
GCTGCACTGG TTGCTCTACT CGATCAGCAT ATTAATTCCG CTATCGGAAT CCAGCTTCTC
GCCAATGCGG TGAAATTGCT GGAAAGCGAG CTTTCCCCGA GTAAATCTTC GCAATTGATG
GACCAGGTAC GTGTTTAGGA CATTGCCAAG GACACTTGGA TGCTTTGTAT TGCGCACCAT
AAGCTACAAC TAACAGTAAT TCCATATTCT CCCGATCGTC AACAGTGGCT CCAAAGGGGT
GGAGCCGGGT CCACGCAACT CCAGGTGCTT CGCATGGGAC TCCAAGCTGC CTGCGTGGTG
CTTTTGATTG CCGTATGCTC AGGGGTCGAC CGACGAGCTG TCAACGAAGA TGCAATAGAG
GCGGCAATTA CCCTTTATCG CTCCCACCTT TCCAAACACA TTGTTCCCGC CTGGAACCAG
ACCGGGCACA TGCTACACAT CAAGTCGTTG GATGAGAAGG CAGGGCTTGC TTCTCCATCA
AAGAAACGAC GGCTAAGCAC CGACGAGAAC TACTCCTCGG CTAGTAGCGG CCTTGTCAAA
GATCTCAAGA AGGTATACAA GCACATTGCT TGTACTGTTC GGCTTCAGTT GACCTTAACG
GAACGTTTGG AACTACTCAT TCGAAAAGTG CCCCTAGACG ATCAGCAGAT TCTCATGCTG
ACTAATGGAT CGCTGATAGG TCTCGAAATT GATTGCGGGG CGCCGAAACT CGGTACCTTT
GCCAAAGACT CGCCTCCACC GCCACAACAG CTTCAGCTCG CTTGCGTCAA TCTTGTCTCA
AGTGCTTTCC GTACTTACCC GTCCCATCGG GACACTATAC TGGAAGACGT GTTTCCACTC
ATGCTACGAC TTCCCACAGG GAAGAAGTCT CTCCGTGCTT TGGGCGTCAA CTACGGTTCG
GCTTCGTCAC CGACAACTCT TGCTGCGCTC AACGCCACGC TGGTTGATGT CACCAACACA
CAGCCAAACA TTCAGACAAT CACTTATTTG ATTCTCTCAT GCATCCAAGC CTGTGTTGTT
CGACCGGTGC TGGACACCAG CGACGATTCT CCACAAGGAC AGATCGTCTC GGGCTTGAAG
GCGTGTCGTG CCGTTAGCGA AGTCTTTGTT TCTCAGCTAC TTAAGAGATG TTCCCGTACC
AAAGACGGTG CACTGGAATA TCGACCAATT CTCGCCAATA TAGTCGAAGA CTTGTTGCAA
CTTACGCTGA TACCCCAATT TCCGGCAGCG GAGCTCGTGC TGGTTTGCAT TTCTCAGCGT
TTGAATCAGG AGCTGTCGGC AGCGTCTTCA TCTGCAAAAA CTAAGAGTCA TTTTCCTCCC
GAGCCGACTT TTCTGACGAT TGCTTTCGAT ATCCTAGGGA AGGTTATGGC GTACCAAGCC
CGTGTACTAG CCACCAGTAG ATCCAAGCCT CTGGCGATAG CAACCACAAT TGAGAACGAG
CCTACAATCC TTCAAAACGA AGTGCATGAA GTGCACCTAG CTTGTCATTG CGGAGATACC
AGAGCTGATG CTCTGATGAT TCAATGCGAC CACTGCCGTA CCGCCTCGCA TTGCTCTTGC
GTCGGTGTTG CCCCCGACGA TATTCCAGAG GAATGGTTTT GCGATGGTTG TCGTCTGGGA
CGCATAGCCT TACGAGAACG ACGACAGTTG GGGGTTGAGG CAGCGACGGG GATCGTGGAC
GAAGTGTTTA CGTACCGTCA TTCCTTTTTG TCCAGACTTT CGCACCGCAT AGGTGTGGCA
GAACTGGTAG ATGCGACACA ATTTCACTTA TCGCGATGGG TGGATGAGAT AGAGCGCAAT
AGTAGATCCA CCATTGACCA GCAAGCAACT TTTCGCCAAC TTGTTCAGGA GTTGTTAACG
CGTTGGGAGG CACCCGTCGG AGCTCTTGGT CCAGGTACGG ACTCGCTGAC GGAAGAAGGC
TCATCGCGAA TCACCTTGCA CCTTCTTGCC CGGACATCGC CACTGTGTTT ATCATTCCGC
CATCAAGTTT CGCTTATTCT GAAACTCATG GCCGACGAGT CTGTACCGAT GCTACGCAAG
CTGGCGGTGA AGACTATTGA AAAGGTATGA AGTCCTGTCT ATTGACGCAT GACTTGTTAA
GTTTGACCTA GAATTCCTCA TATTACACAT CTGTTTCTGT TTTTTCCCTT CAGGTGGCTG
ATGGTGACCC GCAGCTCATG CTTCTCCCAA TTGTTACGAA GGCTGTCTCA CGCAGACTCA
CAGATGACAG CATATCAGTC CGCGAGGCCA CAGTCTCCCT CGTTGGTGCT TACGTAGTAC
AGTTCCCAGC TGTCGCGAAT GCTTTTCATT CATCGTTGCT TGACTGTCTC GTGGACGTTG
GGGTCAGCGT TCGCAAACGA GCCGTGAGAA TCTTTCAGGA GATTCTTATA TCGAACCCGC
GCTATCGAGG TCGCTCGTCC GTTTGTGATT CCATGATTAC CCGAGCTATA GATCCAAAGG
AGGAAGACGG AGTCCGAGAT CTGATTTTTG AACTTTTTAC CAAACTCTGG CTAGAGTACG
ATGATGATGT CATCACCAGT CCTACAGTAC CTTTGCCCAA ACCTGCTTCG ATTCCAAGCT
CTCCGGATGG AAATACCAGA GCACTCCTAT TAGAAGGGTT TGCACTAGGG AGCTCCGTCG
TCACCCCCAC TCCGCCCGCA CTGAGCGAAA GGTACAAACA TTCTCGCTCA AGTCAGAAAC
GGGTCGACAT CGCTGCTGAA CAAATGATGG AAGTGGTCAG AGCTAGTGGT TCTGGAGAAC
GCTTGCATTC TCTAATTGTC GAGCTTCTTG CTGGTTCTAA CAATGCGCGA GCTTGCAAGT
CTTCGGAACG CAAGCAGCGG TCGGCTCTCG ACCAAAAGCA GTGTTCTTGT TTAGTGGAAT
CTCTGTTCGA ACTTTTGCTT CAAGTAGAAG AGCAGCGATC CATCCGAACC TCTCGTGTTG
GGAAGGATGT TGCTGCTACC TTACAAACGA TTGCCGTCTT CGCAAATTTG GCTCCTAACT
CAGTTTTCGA GCATTTCGAT ACAATAGGTC CCTATCTCAA GGCTGACAAC GGCGTTTCCT
TTGACGACGA GTCCAAAATT GTCGGTGCAG TTTGTGATAT AATTGTGTGT CTGTCTCCAA
ACCTGAAGTA CGAGAACATT CAGCAAATGG CCTCAGGGAC GCTGGCGAAG GATATCGTGC
TGGTCATTTA CAAATTCGGT TCTTCAGCTC TGGGATCTGC TATCAAGGCT CTTTCGTCTT
TGGGGCACCA TCCGGATGGT GACGAGAATA GCGTTTTCCG AAAAAAGCTT CTCGAGATGG
CACGAACATT CTACTGCTAC CTTTTGCGGA AAGAAACGGT GGAAGACTTC TCAAATACCG
ACGTACGTTC CATTTTAGAT TTGTAGCACA ATCACGTGGA TCAATCTCAC CGGTGCGTAT
ATTTCTCTTG ACAGGACAAA ACTCGTAGCA ACACCCACCG GGCCTTAACA GTTCTTGGTT
TGGTGTGTCG TTATCATGAA CGACCTTACG GGGTAACGGA AGAAGAAAGT GAAGTGGACG
ACAGTGTGGC TGAAATTTCC TCTTCTGAAT TGACTTACGC AAACCTCATC GTGGGTTGCT
ATAGAATTTT TTCAACGTAC TTGCAAACGC TAGATGCACC GACAAAGTGC TCAGCCCTTC
GTGCACTCGG AGGCCTTTTT GTTTCACAGC CTAGGCTGAT GCTAGAATTG GAGCAAGTCG
GTCTCATCGA GCACGTCATG TCGGAAGAGT CTCACATTAG TCTTCAGCTC GAATCACTTC
AGTGCTGGAA GACAATTTTG TTGGTACGTT GGGTTGACTG ATTTCTGCTG CTTAGTGCTA
TCATACTTAC AGTTTCGTTT TTCGTAGGCG GAAGAACGGC GTATCGACGG CGGAGTCGCC
ACGGAGAAGC TGGAAAAGAA CGAAAGAGTT ACTTTGTCAA ACCGTATCTC CGGGGATCAA
GATGGCGACG CCACGCTATT TGGAGGGGTG CTTACGAACC ACGCAGACCG GCTCTTTGAA
ATGAGCCAAT CCAAGGATCG GCGTGTAAGG TATGCCGCGT TGGATCTAAT TGGGCTCCTA
CTGCGACAAG GGCTCGTAAA TCCAAACGAG TGCATCCCTT TCTTGTTTGC GTTACAAGGC
GACGTAGAGA ATGCCGCCAT CCGTAGTTTG GCCCTTCATT TGTTGATGAA AGAGGGAGAG
CGCCGGCCTG ATGCCTTGCG TCAGCGCATA TGTGTTGGAG CGAAGCAAGC CTATGACTTC
CAACGCCGTA TTTACTCTCA AAAGGACGCA GCGTCTGCAT TGATCACTGT CCGACGAGGC
CGCGTACAGG GAACCGAATG TATTTTCGGC AGCGTTTTTA GAAATTGCAT TTCCAAGAGC
CAAAAGCAAC GTCGTGGACT ATTCAAGAAC CTGCTTTCTT TCTTCGAAAC CGCAGAAGTG
AATGTCGAGA CACCCTTTGC CAAAAATGTC CACCTCCTAA AGATTTCTGG AGGTGGGCAG
GCAAACGGAA GCGACTTGTC CCTTCTATCT TTCACGTCAC AAATTCTTGC GTATCTGCCA
TATGCCGCAG CCAGTGATCC TTTGTTCATC ATCCACCACA TTGGCTCAAT TGTCACAATT
CAAGGGACCC AAATCGTCGA CGCATTTGCT GCTTTATTGC GCCCTGCTGG GTTAGCAAGC
AACGATGAAT ATGATGAAGC TAACGTGACA GAAGATGCAC TCGAAAAAGT TGCCCGTAGC
AAGTTTCCTA GCCGCACCCA GGAGGCGAGT GCTTTGTCCA AAATCGATCA ATTGAAATTC
CTACATCTAT GCCGCAGGGG TGCAGCCATA GTCTTGCTAC TGCGCCTCAA GGCGCACCTT
CGCCGCTCGT ACAATTTGAG CGAATTTCGA TGCCTTGAGT ACGACCCAAA TGCTAAGGAT
CGCATAGCAG AGAAAGGAAT TTCAAAAGTC GACAATTCTC CGCCATTCGA TGCATCGGTG
CCCGCCGATC TCATCCACTC CTCTGACAGC TTTATTCACT GGGACACTAT GATTCGAGAG
TATGCCGAGT TCCGTCAACT AATGCGCAAA GAAAACAGCT TTGATATCCC CATGGGGGAC
GTCTCGGATG AGCAGCGGAT ATTTGAAGAA GTCGTTGACT GA
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| Protein sequence | MSTTPKLMVD PFTEAVERIV LRVTMVEGRE GDYAYKGTAV DGPLLPQELA ELSLLCTRQM
ALEGAKTDAQ GFAAVEVEQL AALVALLDQH INSAIGIQLL ANAVKLLESE LSPSKSSQLM
DQWLQRGGAG STQLQVLRMG LQAACVVLLI AVCSGVDRRA VNEDAIEAAI TLYRSHLSKH
IVPAWNQTGH MLHIKSLDEK AGLASPSKKR RLSTDENYSS ASSGLVKDLK KVYKHIACTV
RLQLTLTERL ELLIRKVPLD DQQILMLTNG SLIGLEIDCG APKLGTFAKD SPPPPQQLQL
ACVNLVSSAF RTYPSHRDTI LEDVFPLMLR LPTGKKSLRA LGVNYGSASS PTTLAALNAT
LVDVTNTQPN IQTITYLILS CIQACVVRPV LDTSDDSPQG QIVSGLKACR AVSEVFVSQL
LKRCSRTKDG ALEYRPILAN IVEDLLQLTL IPQFPAAELV LVCISQRLNQ ELSAASSSAK
TKSHFPPEPT FLTIAFDILG KVMAYQARVL ATSRSKPLAI ATTIENEPTI LQNEVHEVHL
ACHCGDTRAD ALMIQCDHCR TASHCSCVGV APDDIPEEWF CDGCRLGRIA LRERRQLGVE
AATGIVDEVF TYRHSFLSRL SHRIGVAELV DATQFHLSRW VDEIERNSRS TIDQQATFRQ
LVQELLTRWE APVGALGPGT DSLTEEGSSR ITLHLLARTS PLCLSFRHQV SLILKLMADE
SVPMLRKLAV KTIEKNSSYY TSVSVFSLQV ADGDPQLMLL PIVTKAVSRR LTDDSISVRE
ATVSLVGAYV VQFPAVANAF HSSLLDCLVD VGVSVRKRAV RIFQEILISN PRYRGRSSVC
DSMITRAIDP KEEDGVRDLI FELFTKLWLE YDDDVITSPT VPLPKPASIP SSPDGNTRAL
LLEGFALGSS VVTPTPPALS ERYKHSRSSQ KRVDIAAEQM MEVVRASGSG ERLHSLIVEL
LAGSNNARAC KSSERKQRSA LDQKQCSCLV ESLFELLLQV EEQRSIRTSR VGKDVAATLQ
TIAVFANLAP NSVFEHFDTI GPYLKADNGV SFDDESKIVG AVCDIIVCLS PNLKYENIQQ
MASGTLAKDI VLVIYKFGSS ALGSAIKALS SLGHHPDGDE NSVFRKKLLE MARTFYCYLL
RKETVEDFSN TDDKTRSNTH RALTVLGLVC RYHERPYGVT EEESEVDDSV AEISSSELTY
ANLIVGCYRI FSTYLQTLDA PTKCSALRAL GGLFVSQPRL MLELEQVGLI EHVMSEESHI
SLQLESLQCW KTILLAEERR IDGGVATEKL EKNERVTLSN RISGDQDGDA TLFGGVLTNH
ADRLFEMSQS KDRRVRYAAL DLIGLLLRQG LVNPNECIPF LFALQGDVEN AAIRSLALHL
LMKEGERRPD ALRQRICVGA KQAYDFQRRI YSQKDAASAL ITVRRGRVQG TECIFGSVFR
NCISKSQKQR RGLFKNLLSF FETAEVNVET PFAKNVHLLK ISGGGQANGS DLSLLSFTSQ
ILAYLPYAAA SDPLFIIHHI GSIVTIQGTQ IVDAFAALLR PAGLASNDEY DEANVTEDAL
EKVARSKFPS RTQEASALSK IDQLKFLHLC RRGAAIVLLL RLKAHLRRSY NLSEFRCLEY
DPNAKDRIAE KGISKVDNSP PFDASVPADL IHSSDSFIHW DTMIREYAEF RQLMRKENSF
DIPMGDVSDE QRIFEEVVD
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