Gene PHATRDRAFT_50136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50136 
Symbol 
ID7198840 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp158252 
End bp159602 
Gene Length1351 bp 
Protein Length374 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184977 
Protein GI219129610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGCCCCCCTG ACCAAAACGT CGCGTGAGAA AAGGAGCGAT ACCCATCACC ACGAATACAA 
AGTAGGAACA CCAATCTTCA TCATGGCATC CGAAACTGTT CCATCCAACA CTGTAGTTAG
TGACTCGGAA GACATCCTTA CAAAGCCACT CGCGATGGAG GACGAAGTAA AGGCAGAAGA
GAAGGACGTC AAGGAACAAG ATGACGAAAG TAAAGCAGCA GTGGCGCTGA CTAGTCTTGT
CGATACGAGC TTGCCAATAG AGGCGAGCAC CAGTGGAAAT GATGAAGAAA GAATGGACGA
CGAAGAAGAA GAGGAGGAGG AATGCGACGA AAGAGACTTC GAAATTCCTC AGAGGTTCAC
ACGCAGCGGA CGTCGCCGTG CTACTCCTTT CCCCCTCAAG GTAAGTCGTG AGAGGAAGGA
TGAAGCGTGC GTGTTCGTGT TTCGAATAAT TTACTTTAAC ATGAGGTTCC ATTACAGTTG
ATGAAGGTTT TGTCCACTAA GGAGTTTTCT GAGATCATCG GTTGGCTGCC TTCAGGAAAA
TCGTTCTCCA TCATCAAACC TAAGGTCTTC ACTGTAGAAA TTCTTCCAAC CTATTTCAAA
AGTGCCAAAT ACTCTTCCTT TACTCGCAAG CTCCACCGTT GGGGGTTTAT GCGTCACTAC
AGGGGACCAG AAGCGGGGGC ATTTTACCAC AAGGACTTTC AGAAGGGGCG TCTTGACCTT
GTTGAACAGA TGACATGCCA CAAGATAGAA CCTCCTAAGT CTTCCGTTAC GAAGGCAAAG
CAAGTCAGGA AGTCTGTACC ACGCGATACG ATTGCCAATG CCGTCGGTCG ATCACCCAGG
TCAATTGATA TGCATTCGCT GGCTCGTGGT CCTAGTATGC AGTCGGCTTC GTTTCCTCCT
CACCCGATGG ACGCTGATTT GGCAATCGAG CTCGAAGTTG CTCGACGTCT TCGTCAGCGC
ATGGATGCTG CGGCTTACAA TCAACAGGCC TTACTCGCCA TGCAGCAGCA ACAGAAACTC
CAAGCTCTAC GAGTCCAGAA TCTTGGAAGT CATTCTTTGA TGGGATGGGA TGCGTCACCG
GCGACCTCCT TGCCTGGCTA TGCTTCTTCC CTTTCAAGCT TGAATATGCG AGGGTACGGA
GCTTCATCAC TGCCTCGGTC GGGCTTCGAT CAGGGCTATT CCATGGCCGT GAATAAGGCT
CAATACGATC ACGCCTTCAA CTACTCCGCT TACGGTGATC TACGGTCGTA CGAATCCAAT
ATCCATGGGG CAAAGACGGC GTGAGATTCA TTGATGCACA GGCCTTTATC TATTGTTCGA
TGTAAGAGAC TTAGGTTTCC TTTTACTATC T
 
Protein sequence
MASETVPSNT VVSDSEDILT KPLAMEDEVK AEEKDVKEQD DESKAAVALT SLVDTSLPIE 
ASTSGNDEER MDDEEEEEEE CDERDFEIPQ RFTRSGRRRA TPFPLKLMKV LSTKEFSEII
GWLPSGKSFS IIKPKVFTVE ILPTYFKSAK YSSFTRKLHR WGFMRHYRGP EAGAFYHKDF
QKGRLDLVEQ MTCHKIEPPK SSVTKAKQVR KSVPRDTIAN AVGRSPRSID MHSLARGPSM
QSASFPPHPM DADLAIELEV ARRLRQRMDA AAYNQQALLA MQQQQKLQAL RVQNLGSHSL
MGWDASPATS LPGYASSLSS LNMRGYGASS LPRSGFDQGY SMAVNKAQYD HAFNYSAYGD
LRSYESNIHG AKTA