Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50107 |
Symbol | |
ID | 7198912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | - |
Start bp | 58220 |
End bp | 59843 |
Gene Length | 1624 bp |
Protein Length | 396 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185040 |
Protein GI | 219129741 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000637615 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAGCATTCTA AGTCGAGCAG ACGACCGAAG GGGGAATTTC CTTTCAAAAG TAGGCGTTCT TGTGGCCCTT TGCTTATCCT CTTTTGCTGC CGCCGAACGA TGAGGGTCAT GACAAAAAAA GTTGGTGTCT TCTCGCTAAT AGCATTATCA ATCGCGAGTT TCGTGCTCCA GTTTCGTTCT GCATCGGATA TAAGTAAAGA CGAAGCACTC CTGCACAAAG AGTCCTCGGA CTTCGTCCCG TGGAATCGGC ATGCCCTCCG GACAGAGCAA GGGTCGCCGA CTGTGACAGG CAAGTGTGCC ATAAATATGT ACGGGCTACC GAGAGCATTT CAATCTCTCG TTTTGCCTTC ACTCATCAAA AATGTGATCC AGCCGAACGC CATCTACAGC TGCGACTACT TTGTACACTA TTACAACTTG ACTGAAGAAA CAGCGGGACG ATCTGGAGGT GGAGGACGTA TAAATCCGGA CGAGATCCTT TTACTTAAAC AAGCCGTGCA AGACGTCTCT CCGCAGTCGA TCGTGGAATT TCATCACGAC ACAGAAGCAG CCTTCTGGGA TCGGTATCAA CCCCTTTTAG ACAAGATTCG GACAACTAAA GCTACTGATG GCCACTATTT GTACTTTCCA TGGCGAGCCA AAACCTACAA ACATCCGATT ACAACGGACA ATATCATCAA AATGTGGCAC AGTATTCAAT CAGCATGGAA CTTGATGATG GAACACGAAA CTTTGACATC CCAACCGTAC ACGCGGGTTG CCATGCTACG CTCGGATGTT GTGTATATGA CACCGATCAA CGTTTTTGAA ATCAGTCGCC GAAAAGTTCT TGACAATGAA AAAGCAGCCC TTGTCCCCGC TTTTGGGCGG CACCCTGTGA GTGATCGCAT CATCGTGGGG CCAAGGGATG CGGTCAAAGT GTGGGCGACG GAGCGTTTTG ATCGTCTCGA AACGCACGTG ACCTTTGTAC AAGAACACAA TCCGGGCTGG GGTATGCATT CGGAAAAGTT TCTGAATTGG ACAATTTTCC CTGCGATTCG AGAAACGGGG ACATCAATTG TGGAAGACGA CTACTTGTGC TTCTTTCGCG CTCGTGCCGA TGAGACAGTG TGGATCAAGG ACTGTGAGGG AAAGCACGAA GGGATCGCAG CGCATTCGAT TCTGAAGAAT CTTGGAGGCA ACAAGAAGCA CGTTTTGGAG TCCGTACTTG GACGGAAGTG CCTCGACGGA GTGCAGCGCC TCACTCACTC GTTTGCGGCG GTGCACTGTC CGATGCAGAT GCCACTATAG AGTACTGATG CTTTACAGAA TTTTATTGTT TTCTTTAGCC ATCGGGAGCT GAGACGTCGA TGACTGCATG AAAGAGGGGC CAGCTTTGAG CCAGGCACAG GGTTCTATAT CAAGGCATCC ATTCATGATA CCTGTAATGC CAATGCTGTA TAGAAAGAGG CTGTTTTTGT TATTTCTGAT TCCAGACTAC CAAAAGTAAT CAGGATCGGC ACACTTGGAG GTCAGATTTC TCGTGATAGA ATAAATTTGA ATGGTTTTGC AGATTCTCCA CCACGAGTGC GAGTCATCTC CGTGAACCAA AAATTTTTGT TACAATAAAA TTTATTGCCA TTCT
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Protein sequence | MRVMTKKVGV FSLIALSIAS FVLQFRSASD ISKDEALLHK ESSDFVPWNR HALRTEQGSP TVTGKCAINM YGLPRAFQSL VLPSLIKNVI QPNAIYSCDY FVHYYNLTEE TAGRSGGGGR INPDEILLLK QAVQDVSPQS IVEFHHDTEA AFWDRYQPLL DKIRTTKATD GHYLYFPWRA KTYKHPITTD NIIKMWHSIQ SAWNLMMEHE TLTSQPYTRV AMLRSDVVYM TPINVFEISR RKVLDNEKAA LVPAFGRHPV SDRIIVGPRD AVKVWATERF DRLETHVTFV QEHNPGWGMH SEKFLNWTIF PAIRETGTSI VEDDYLCFFR ARADETVWIK DCEGKHEGIA AHSILKNLGG NKKHVLESVL GRKCLDGVQR LTHSFAAVHC PMQMPL
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