| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50103 |
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| Symbol | |
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| ID | 7198821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011695 |
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| Strand | - |
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| Start bp | 47017 |
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| End bp | 48900 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185036 |
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| Protein GI | 219129733 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCGA GGAAGGCCTC TCGCTACGGC GTGGAAAACG CTCAATGGAC GCAAGCACCC
CTGATCTGTC GGACAATCAT TTGTTTCTTA CTGATAAACC AGTCTAGAGC TATAGTGATC
GAGGGCATCC CGCGAAGTTA CATAGGACCA TCTTGTCGTT CCAAGTACTT CTGCTGCCGG
AACCCGGCGT TTCCGTTTAT GGCAGTATCC AGAGCACCCT GTTTACGGAA TCGGCGTCAA
AGAACGAGGC GTTATGAGAG CTTTCGAGAC GATAGGGATA GTGCTTTGGT ATCCGCATCC
GACCTTGTAT TTAATGGATC GACATCGGCT GCTTTAACAT GCTCACCCGA GGAGCAAACC
AGCCGTACTT CACAATCTTC CGCCACTTTT TCCGAAGTCG ATGTACTGTA CGGAAGGCGA
GCTGTGCTCG TGTATGATCC CTTACAAGAG CGCTACGTGA AAGTTTCCGA GAAGAACAGA
GTAGCCGACA GCACCAAGCA AGAGTCGGTA GCTCTACGGG CACGCCGATC ATCTCTCGCT
CGATTTATTA CCACCAAAAT ACTCCCCCGT CTTTCGCTCG CCTTCCTACC ATCAGGTGTC
ACAAACGACT ATTATCGATT TGTTCGTTGG CGTATACTGC AGCGTTTCGT CAATGCCAAT
CTGAACGTCT TTGGCACGCA GAGTCTGCTT TTGGCGCTGC GAATTAAGAG CTCGGCTTCG
CAGCTCGGCG CCTTGTCCGC CGCTCTTAAC TGGGTCCTCA AAGACGCCTT GGGAAAGATT
GTCCGGATGC TCTGGGCTTC CCGTATGGGA CGGAGGTTCG ACTCGGACGC TAAACGATGG
CGGTTTCGTT CCAGTTTTGT CTTTGCTGCT GGCAATGGAC TCGAAATCAT CACCTACGTG
TTCCCATCGC TCTTTCTACT GTGGGCAACG TTGGCAAACT GTTGCAAACA AATATCGATG
CTCACGTCCA GCTCTACACG CACGTCAATC TACAACTCCT TTCGGGACGG ATCACGGGAA
AACATTGGCG ATATTACTGC GAAAGGTGAA GCGCAAATTG CCATTGTCGA CCTATTGGGG
ATCGCGAGCG GCGTAACCTT GTCCCGCACG GTTGGTACCT CAATTCGTGC TGTACTCGCC
GTATACGTAA CACTACAAGC GATTGAGATT GTCTGTGTGT ATCACCAGTT GCGAGCGGTC
ACCTATCGAG TTATGAATTT TGAACGAATG ATTTCCGTTG TGGCAGACTT CTGTCAAGCC
CGCCAAGGAC CAAAAGACGG ATTAGAAGGA CTAGCCGCGT CGTGCACGAC GCCTACTCCC
GCTGGAATTC CCACTCCACA GACATTGGCG TCGCAAGAAC GCATATTTTT GCCACCGAAA
CATTTGACTC GTCGCGCCAT TGCCTTTGGG TCCATCGGCC GTGCCAGGCT CTCTCCCGAC
GAGCTGGGAA CGCTTCTCGA AATTTTTAAG AGAGAGCGTT TCATTCTCGT TGTTGGAAAG
AACGTCAAAC ATCCGAGACC ATTTATGGCG AAGACTGCAA AGCAGAATGA AGATCCGGTT
TCGCGGATTC AAGAAAATTG CCATATTGTG CTGCACGAAG CAGCCACCAA TATGGATATT
GTGAAGAGTA CACTTGCGTT GACGCTTTTA CGACGGAAGT TGGCCTTGTC AAAATTCGAT
CCGTCTCAAG TGAGGTCGTC CAATTGTTTT GATATAATGA AGGTGACGCA AGAAGAAACA
AACGATTTGT TCCCCTTACT GCTGCGAGAA ATGAATACGC AGGGGTGGGA GTCGCCGGCG
CGATTCATGT TTGGAAGGGT GCACATGAGA GCTGACTGGC CTCTCACAGC AAGGTCCAAG
GGAAGAACAA CATCTGCCAC ATAA
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| Protein sequence | MRSRKASRYG VENAQWTQAP LICRTIICFL LINQSRAIVI EGIPRSYIGP SCRSKYFCCR
NPAFPFMAVS RAPCLRNRRQ RTRRYESFRD DRDSALVSAS DLVFNGSTSA ALTCSPEEQT
SRTSQSSATF SEVDVLYGRR AVLVYDPLQE RYVKVSEKNR VADSTKQESV ALRARRSSLA
RFITTKILPR LSLAFLPSGV TNDYYRFVRW RILQRFVNAN LNVFGTQSLL LALRIKSSAS
QLGALSAALN WVLKDALGKI VRMLWASRMG RRFDSDAKRW RFRSSFVFAA GNGLEIITYV
FPSLFLLWAT LANCCKQISM LTSSSTRTSI YNSFRDGSRE NIGDITAKGE AQIAIVDLLG
IASGVTLSRT VGTSIRAVLA VYVTLQAIEI VCVYHQLRAV TYRVMNFERM ISVVADFCQA
RQGPKDGLEG LAASCTTPTP AGIPTPQTLA SQERIFLPPK HLTRRAIAFG SIGRARLSPD
ELGTLLEIFK RERFILVVGK NVKHPRPFMA KTAKQNEDPV SRIQENCHIV LHEAATNMDI
VKSTLALTLL RRKLALSKFD PSQVRSSNCF DIMKVTQEET NDLFPLLLRE MNTQGWESPA
RFMFGRVHMR ADWPLTARSK GRTTSAT
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