Gene PHATRDRAFT_50101 details

Gene Information

• Locus tag: PHATRDRAFT_50101
• Symbol: LUT1-1
• ID: 7198820
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: -
• Start bp: 41103
• End bp: 43229
• Gene Length: 2127 bp
• Protein Length: 644 aa
• GC content: 50%
• Product: lutein deficient 1-like protein
• Protein accession: XP_002185034
• Protein GI: 219129729

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCACAGTCAT ATAGATACTT CTAGAGTGCT TCCTCTTGTG TTAGTCAATT TCGTTTGCAT 
CCATCGCTAC GGTGAGAATG TATTCCATAA CTTTCTTGTC CTTAACAGCG GTGGTTGTCG 
TTGCTTGCTT CTTTCCGAAA CGCACACAAT CGCTAGTCGT CCCATTCCCG TCTTCAGCTG 
TCCGTTGTTG TTTCGGCATT CACCGTCAAT CCCGCGTTCT GACATCTGCC TTGTTCTCCA 
CAACCGAGGA CAAGACCGAC GAACAGACGG ACAATAAAGC TGGCGAGCCG GCAACCATGA 
AAGGCGAAGT CGCATCATCC GTCATAACAA CCGAAAAGAA TCCAGACGCC GAGGGTCTCC 
CATGGTGGTG GGAAGTGGTA TGGGATCTTG ACATAATGCA AGTTGGCAAG TCAGGTGAGG 
AGATTTCCTT TGGTGATTCG GCAAATGTCT TGCGGACGAA CATTGAGCAG ATCTACGGAG 
GATTTCCCAG TCTCGACGGC TGTCCCCTAG CCGAAGGAGA GCTTGCAGAC ATTGGCGATG 
GTACGATGTT TATTGGGCTA CAGAACTACT ACCGGAACTA CGGAAGGTAT GACGAAAACA 
AATTTCGTGT GCGTAGAGGC ATTCTCATTT GTATTGTGAT ATCGCCTTCG CATCTCACAC 
TCCGCTTTCT CTTCCTCAGT CCATACAAGC TGTGCTTCGG TCCAAAATCG TTTCTCGTAA 
TATCTGATCC TGTACAAGCG AAACACATTC TCAAGGATGC CAACACCAAC TACGATAAGG 
GCGTTCTGGC CGAAATTCTC GAACCGATCA TGGGAAAAGG CCTGATTCCG GCTGATCCCG 
AAACATGGAG CATCCGCCGC CGACAGATTG TTCCAGCCTT TCACAAAGCA TGGCTGGAAC 
ACATTGTCGG CCTTTTCGGC TATTGCAACC AACCTTTAAT TGATACACTC AACAAGCGCG 
TTGACGGAGA TGGCAAGGTA GAAATGGAAT CCCTCTTTTG TTCTGTCGCA TTGGATATTA 
TTGGCCTGTC TGTTTTCAAT TACGAGTTTG GTTCCGTAAC TCAAGAGTCC CCTGTAATCA 
AAGCGGTGTA TTCGGCGCTC GTGGAGGCGG AACATCGCTC CATGACCCCA GCCCCGTACT 
GGAATTTACC TCTGGCCAAT CAACTTGTGC CCCGCCTCCG TAAATTCAAC AGTGATCTCA 
AACTTTTGAA CGATGTTTTG GACGACCTCA TTACCCGGGC GAAACAAACG CGGACAGTGG 
AAGATATCGA AGAGCTCGAA AATCGAAACT ATAATGAGGT CCAAGATCCC TCCTTGCTAC 
GATTTTTAGT CGACATGCGT GGTGCTGATA TTGACAACAA ACAATTGCGG GACGACCTGA 
TGACTATGTT GATTGCCGGG CATGAAACAA CCGCTGCTGT CTTAACTTGG GCGCTCTTCG 
AACTTACCAA GAACCCCGAA ATTATGAAAG AGCTGCAAGA CGAAATCGAT GAAGTCGTTG 
GAGATCGCAT GCCCAACTAC GAAGACATCA AGAAAATGAA ATTCTTACGC CTCGTGGTCG 
CAGAGACTTT GCGAATGTAC CCCGAGCCTC CTTTGTTAAT CCGCCGATGC CGTACTCCCG 
ATGAGCTTCC ACAGGGGGCC GGCCGTGAAG CTAAAGTAAT TCGAGGCATG GACATATTTA 
TGGCCGTGTA CAACATTCAC CGCGACGAAC GGTTCTGGCC TAGTCCCGAT ACCTTCGACC 
CATTACGTTT CACACGGTCG CATTCCAACC CGGACGTTCC GGGTTGGGCA GGTTTTGACC 
CGAAAAAATG GGAGGGAAAA TTGTACCCGA ATGAGGTCGC GTCGGACTTT GCCTTTTTGC 
CCTTTGGTGG TGGCGCCCGA AAATGTGTCG GAGACGAGTT TGCGATACTT GAGGCTACAG 
TGACGCTTGC CATGGTGCTA CGACGATTCG AGTTTTCTTT CGACGAGTCC AAGTTCGAAG 
GCAAGGATGA CATTTTGAGC TCGGCCCAAG GACTGAACCA TCCTGTTGGT ATGCGGACGG 
GGGCAACCAT ACACACTCGA AATGGGCTTC ATCTAGTGGT CGAGAAGCGT GGGGTACCGA 
AATAATCATA AAAGATTGTT GGAAGTC 

 

Protein sequence

MYSITFLSLT AVVVVACFFP KRTQSLVVPF PSSAVRCCFG IHRQSRVLTS ALFSTTEDKT 
DEQTDNKAGE PATMKGEVAS SVITTEKNPD AEGLPWWWEV VWDLDIMQVG KSGEEISFGD 
SANVLRTNIE QIYGGFPSLD GCPLAEGELA DIGDGTMFIG LQNYYRNYGS PYKLCFGPKS 
FLVISDPVQA KHILKDANTN YDKGVLAEIL EPIMGKGLIP ADPETWSIRR RQIVPAFHKA 
WLEHIVGLFG YCNQPLIDTL NKRVDGDGKV EMESLFCSVA LDIIGLSVFN YEFGSVTQES 
PVIKAVYSAL VEAEHRSMTP APYWNLPLAN QLVPRLRKFN SDLKLLNDVL DDLITRAKQT 
RTVEDIEELE NRNYNEVQDP SLLRFLVDMR GADIDNKQLR DDLMTMLIAG HETTAAVLTW 
ALFELTKNPE IMKELQDEID EVVGDRMPNY EDIKKMKFLR LVVAETLRMY PEPPLLIRRC 
RTPDELPQGA GREAKVIRGM DIFMAVYNIH RDERFWPSPD TFDPLRFTRS HSNPDVPGWA 
GFDPKKWEGK LYPNEVASDF AFLPFGGGAR KCVGDEFAIL EATVTLAMVL RRFEFSFDES 
KFEGKDDILS SAQGLNHPVG MRTGATIHTR NGLHLVVEKR GVPK