Gene PHATRDRAFT_50096 details

Gene Information

• Locus tag: PHATRDRAFT_50096
• ID: 7198886
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: -
• Start bp: 4334
• End bp: 6473
• Gene Length: 2140 bp
• Protein Length: 640 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002185027
• Protein GI: 219129714

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAACACTGAA CATCCGTAAT CGTCAAGCCC ACCCCTCAAT CTTCAAGAGT AGTGTTTGGG 
CAAACCATGC CTACCTGTAC TGAAGATCCT TCGAAAGAGC CCGAGCCGAT AAAGCTGTCT 
GCATTGTCAA ACGTGTCTGC AGGCCGCCAG GTTCCGCTCG TCGAGCTGTC CCTCCAAAAT 
GTTACGTACG CCCCCCTCAC CACCAAAGCG TCTAGTAATG GTAAAACGTC CGGTAGGAAG 
CGGACCACCG TCCTCCAAAA CATTACTACA ACTATTTCTC CGTACAAACT TACGGCTTGG 
ATGGGACCGT CGGGATCCGG GAAAACGAGT CTCATTTCGA TCGCCGCTGA TCTGACTAAA 
TCCGGCGATC TCGTAGAAGG AAGCATCATA ACAGTGAACG GAGAAGAAGG AAAAATACCC 
AAGCGGATTG TTGGTGTCGT ATGGCAGGAT GACCTTCTAC TGACAAATCT AACAGTGGAG 
GAGAATATTT ATTACTCTGC GCGACTAAAG ACACCTGAAT CTTGTTCTGA CGAACAAGTG 
AGTGCCGTCG TATTGGAGAC CATGATAGAG CTCGGTTTGA CGGACATCCG AAATAGCGTA 
GTGGGAAGTC CACTAGGCGT AGTGCGTGGC GTTAGTGGAG GTGAACGCAA ACGTGTTTCC 
GTAGCGTCAG AACTTGTGGT AAGGCCATCC TTGTTATTGT TGGACGAACC CACATCCGGA 
TTGGATGCAA CAACGGCCCA AGCATTGATA GGAACCCTCA AGGTTCTGTC CAATATGGGC 
CACTCAATTG CAGTCGTGAT TCATCAACCC AGAACTACTA TTTACAACAT GTTCGACCAC 
TTGTTGTTGC TTAGCCAAGG GTCAACCGTT TTCAACGGCA ATCCTTCGAA AGCACGAGAA 
TACTTGGAAT CTTGCCCCAT TGTTGGTGAA TTACCACCAG AGACAGGCTT GGCCGATTGG 
ATAATGGACG TGATAAAAGA GGACGAGCAA CGGCGAGAAG CTGCAATGCT TGCGAGTCAC 
TGGGCAGAAT ATATAAACAA GGAGAGCGTT CATAGTATGA TCTCGGACAG CCTTCGTAAG 
ACCCTGAGTC GCAGTATGAG CAGTCTGCAC GAGCTTCATG CCGTTCCAAA GTTCAACAAC 
AGCTTCCGCA CACAGCTTAA GCTCTTGACA TCTCGCACCA TGAAACAGCA ACGCGGCGAA 
CGATTGACAA TGACTGCTGT GATTTTACAA CTTCTGTATT TGTTCTTTTC AGCTGTATTG 
TGGTATGTGG CTGGTATGGG AGTTGGATTG CTATCACGGC AAATGAACGT CTCATTCTCT 
GTGAAATTTT CAGGTGGCGC TTGCCTAATA ATACAGCACG GACGTTTGAG CGCAACTCCT 
TACTATTCTT CATGATTATT GCGCAAGCAA ATGGAATTGT TATTTCAGCA GTGACAGTCT 
TCCAGCGAGA ACGAGCTCTG CTGAAACGAG AACGCGCGAA GAAAATGTAT GGCGTGTCAA 
GCTATTTTTT GGGAAAGACA GCTTCCGATA TGACCAACAA TGTTTTGCTT CCTGTTCTTT 
ATGGACTTGT GGTATATTGG ACCGCCGGAT TTCGACCTAC GTTTGAGGCA TATCTCAAAT 
TCTTTGTTGC TTTCTATTTG ACCTTGTCAA CTGCTCAAAG TATGGGGTTA TGGATGAGCA 
TAGCAATTCC CAATATGCAA GTTGCGCTTG TTTTGGCACC TCCAATTACG CTCTTTTTCA 
TGATAATGGT AATTACTGCA TCTGTCAGCG CATGTCCCCC GCACTATATT GAAGTTTTAT 
CTAACTGGGA TCTGCTCTTA CTTTTTAGGG CGGTTTCTAT ATCCCACTGC AAAACATGAA 
CCGTGGAATA GCATGGGCTA GCTGGATATC TTTTGCACGG TATGGCTATA GTGCCTTGAT 
CATTAATGAA TACGCGGGTC GAGACATCCC ATGCTTGGAT GATGGTGAAG CTTCTATTGC 
AATTGGTACA GGGGTGTGTC CGCTACCTGG TGAAGAAGTC ATAGCGAGTT TAGGAATCAC 
TGGTGTTGCT GAAAGCTATT GGTTCAACAT TGGTATGACC GTTGGTTTGC AGGTGATGTT 
CCGCGTTGCT GCATATATTT TTCTCAGGCG CGCAGAATAG 

 

Protein sequence

MPTCTEDPSK EPEPIKLSAL SNVSAGRQVP LVELSLQNVT YAPLTTKASS NGKTSGRKRT 
TVLQNITTTI SPYKLTAWMG PSGSGKTSLI SIAADLTKSG DLVEGSIITV NGEEGKIPKR 
IVGVVWQDDL LLTNLTVEEN IYYSARLKTP ESCSDEQVSA VVLETMIELG LTDIRNSVVG 
SPLGVVRGVS GGERKRVSVA SELVVRPSLL LLDEPTSGLD ATTAQALIGT LKVLSNMGHS 
IAVVIHQPRT TIYNMFDHLL LLSQGSTVFN GNPSKAREYL ESCPIVGELP PETGLADWIM 
DVIKEDEQRR EAAMLASHWA EYINKESVHS MISDSLRKTL SRSMSSLHEL HAVPKFNNSF 
RTQLKLLTSR TMKQQRGERL TMTAVILQLL YLFFSAVLWW RLPNNTARTF ERNSLLFFMI 
IAQANGIVIS AVTVFQRERA LLKRERAKKM YGVSSYFLGK TASDMTNNVL LPVLYGLVVY 
WTAGFRPTFE AYLKFFVAFY LTLSTAQSMG LWMSIAIPNM QVALVLAPPI TLFFMIMGGF 
YIPLQNMNRG IAWASWISFA RYGYSALIIN EYAGRDIPCL DDGEASIAIG TGVCPLPGEE 
VIASLGITGV AESYWFNIGM TVGLQVMFRV AAYIFLRRAE