Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41038 |
Symbol | |
ID | 7198939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | + |
Start bp | 199732 |
End bp | 200709 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184987 |
Protein GI | 219129631 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCCGA TTCTTCGTTA CATCTTTTCG GCATTGATCG CGCTGTACGC AGCTTCAGTT TCAGATGCCT TTGTAGCTCT CCAATTTAAG ACTGCTCCGG CTGGTGACTG CCGATCGGCT TTCGGTTTGC GAGCGACCCC GGCCGACGGC ATTTCTCGAT TGGAAACTTC GCAGGCTTCG ACGGTGCAAA ATCTTGTGGC GGCCATTCCG GATCTCGCCG TCAAAGCCGA CTTTTCGTGG GAACCAGGAA GTGGCGTAGC AATTGCTGGA TTCCCGGCGA GCCTGGATGC CCGTGATGCT CCCGGACCTG CCAACATTGC ATGGCTGTCG TCCCTCAACG TGGCGTCTAA ATTGTCCTCC TTGACCATTT TCAACGGTCC ACTGACGAGC GTTCCACACC TTTTGTCACG GTGTGCCGTA GTTAATGAGA ACTCGCTACT GTTTACGCTA GATTTTCGAC CACGCGCGTA TGGTGCTTAC GAAATGGTAC GCCCGGACGG CACCTATCCC GATCCTGACG AACTCGGTCG TAAGTCGTTC GAATATTCCG GCGCGCGAAC GGAATACGAA TCCAAATTTG GCAACGACCA AGTGAAAGCA TTCTTATCTT CCACCATGGC ATCTTTTGAA GATGCCTCCG TGGTACCCGG TCCGACCTCG GAGTTTGACG GTTTGACGCG CGGTCCCTTA ATTTTGTCCG TGACCATGCC GTTGACGGAC GGCAATGTCG CGGCGGTCGA AAGTGCACGC CTCCAAGCGG CCAACATTTG GCTTTCTTGG GCGCAGAGCG GCGAGCACGA TCACCGACCG GGAGCGCCAG TCAACACCCA GTACGTTTAC GATAGCAAGT ACAAACAAAA CGCCTACAGT GCCCTACTGC CCGTGTACAT CGAAATGTTC GGATCGGACG AAGGTGCTCG ATTGGCAGCG GCCGACTCGG GTCCTCTCGA CGAAGGTTAC GTTGGTGGAG GTAGCTAA
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Protein sequence | MMPILRYIFS ALIALYAASV SDAFVALQFK TAPAGDCRSA FGLRATPADG ISRLETSQAS TVQNLVAAIP DLAVKADFSW EPGSGVAIAG FPASLDARDA PGPANIAWLS SLNVASKLSS LTIFNGPLTS VPHLLSRCAV VNENSLLFTL DFRPRAYGAY EMVRPDGTYP DPDELGRKSF EYSGARTEYE SKFGNDQVKA FLSSTMASFE DASVVPGPTS EFDGLTRGPL ILSVTMPLTD GNVAAVESAR LQAANIWLSW AQSGEHDHRP GAPVNTQYVY DSKYKQNAYS ALLPVYIEMF GSDEGARLAA ADSGPLDEGY VGGGS
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