Gene PHATRDRAFT_41011 details

Gene Information

• Locus tag: PHATRDRAFT_41011
• ID: 7198836
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: -
• Start bp: 132600
• End bp: 134783
• Gene Length: 2184 bp
• Protein Length: 727 aa
• GC content: 61%
• Product: predicted protein
• Protein accession: XP_002185055
• Protein GI: 219129772

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGAAAG TCCTGGACGA AGATCAGCTG CGGCGCAAGC AAGACTTGGA ACGTCGTCGG 
ATCGTGCGTC GGCAGGCCAA GACCGCCGAA CAACGGGAAC GTGCTGCACG CCACGACGGC 
GGTTCCCGGA CCGACCCGCA TCGTCACGTC ACGGGAGAGT CCGTATCCTC CGACGGAGCC 
CATCCACAAT CCCCGCTCGA GCGTTTGCCC CAAGATGCCC TGCAAGTTGT CTGTTATCAC 
TTGGCCGCCG CCGACCTCGG ACGTCTCCTT CTCTGCAGTA CGCACTTTAG TGACATACTG 
GCCGATGCGA GACTCAGTTA CGTACTCGCA CGCTTGTACC GGCCTAACTC GGCCGTGTCC 
GGTACCGTGG GGTACACGGA CCTGTGTCGA TCGGAAACCG CCGCCCGGAA ACTCCTGGAA 
CAGTCCTACG GCGGCGGCGA TACCGGACAA CTCCTCGTTC GCCGGAAACT TTCCAAAGCC 
GCCAAAGCAG CCGGACAAGT CCCCGTTCCC TACGAATTCG TTTCGTACGC GCGTTTCCTC 
GAACAAGCCG TCAGCGGATA CGCCACCCTC GATACCGGCC ACGCCGCCGA ACCGATACGC 
TTGCCACGAT CCGTGCAAGG CCGATTCGCT TCCGTCTCGC CGGAACATTC CCTCTGTCGA 
GTCGGGGGCG ACGGACAGTT CTGCGGAGCC GGAGGCTCCG GAGTCGCCGC GTGGGGCGTC 
GGACGGCGGG GACAGCTGGG ACACGGAAAA AGACGCGACG AACGACTCCC GCGACGGCTC 
CGTGGAGGAA TCGGTTACGC CGTGCGGATT GTCCAAGTAT CCGCCGGTGG AGGTCTCGTG 
CGTGTCGCCC ACTCGCTACT CTTGACCAGT ACCGGGAGAG TCCTCTCCTT TGGAACCGGA 
CAGTACGGAG CCTTGGGACA CGGATATTCC GCAGCCAAAC AACTACCCGA CGTCATGCGT 
CCGCAGTACG TCGAAGGCTT GGCACACGTC CGGGTGTGCT GCGTCGCCGC CGGAGAATTG 
CACTCCGCCG TGGTTACTAG TGACGGAGAC GTTTACACCT GGGGAGACGG CTTTTGTGGG 
CAATTGGGAC ACGCTGACAA ACGTCCGCAA CTGGCTCCGC GCCAAGTCAC GGCCGGGGGA 
TTGGAAGACG AAGTCGTCGC TTCGATTAGT TGCGGCAGTC GACACACCCT GGCCGTAACG 
GAAGACGGTG AAGTCTTTAG TTGGGGATTG GGACACTTTG GAGTCTTGGG ACGCTCCTTC 
ACCCCCTTTG ATTACGACGC CGATGCGGCC GTGGTCAATT TCACCGTGGA AGAGACCCTC 
CCGGTGGACG GAGCCGTGCC AATTCCTGTA GCAAGGATTC CGGACAACGT CGCTCCGGCG 
GTGGACTCAT TCCCACCACG CGACGCCGCG GCACCCGCAC TACTCGAAGG CCGCAACTTT 
GCGGCCGAAC TCATGGCTCA TTTGGATCTC ATTGCCAATC TGTCGCTCGA CGATTCCAGT 
GATCAGTGTA TACCCAAAGT GATCGAGTCG CTGCAGGGCA TTCCCATGGT CGGCGCCAGC 
GCGGGTCACC GCCATTCCCT GTTACTTTCG CAAGAGGGCG CACTCTATTC GTGCGGGGCC 
GGCAGTGGCG GTTGTCTCGG ACACGGTGAC ACGCAATCCC AAATGCACCC CGTCCGGATT 
ACCGCTTTCG ACGAACCGGA AGAGGACGGG AGCGAGCGCA CACGGATACT GCAAATGAGT 
GCCGGTGTCG ACATTAGCAT GGCCGTCTCG ACCAGAGGCT CGGTGTACGG CTGGGGCAAG 
ACCGACGGCG GCCGCATTGG ACTAGGCATG GCCCGGAATC AAGTCACCCT TCCGCGGCGT 
GTCAGTGTCT ACCGGGAAGA GGACGGATCA CCGGTACTAG CGGTCGATGT GGAATGCGGC 
TACGTCCACT CGATTGTGGT GGGGTTGGAC GGGACCATCC ACATGTGTGG CGGAGTCGGG 
GTGGAAGGCG AAGCCGACGG ACAAGAACAG AATGAGGAAT CCAAGTCGGC GACGGTGGGC 
AAGGCTCGGG CCGTGCCCGA CTTTAACGTA TGGCATCGTC TCCCCGAGCC CAAGGAACAC 
GCTCCGAAGG AACGGTGGAA GAAATTCGGC AAGTACGAAG TCAAAGGCCG GAGACAAATG 
CTGGAGCAAA CGGCGGATTC GTAG 

 

Protein sequence

MPKVLDEDQL RRKQDLERRR IVRRQAKTAE QRERAARHDG GSRTDPHRHV TGESVSSDGA 
HPQSPLERLP QDALQVVCYH LAAADLGRLL LCSTHFSDIL ADARLSYVLA RLYRPNSAVS 
GTVGYTDLCR SETAARKLLE QSYGGGDTGQ LLVRRKLSKA AKAAGQVPVP YEFVSYARFL 
EQAVSGYATL DTGHAAEPIR LPRSVQGRFA SVSPEHSLCR VGGDGQFCGA GGSGVAAWGV 
GRRGQLGHGK RRDERLPRRL RGGIGYAVRI VQVSAGGGLV RVAHSLLLTS TGRVLSFGTG 
QYGALGHGYS AAKQLPDVMR PQYVEGLAHV RVCCVAAGEL HSAVVTSDGD VYTWGDGFCG 
QLGHADKRPQ LAPRQVTAGG LEDEVVASIS CGSRHTLAVT EDGEVFSWGL GHFGVLGRSF 
TPFDYDADAA VVNFTVEETL PVDGAVPIPV ARIPDNVAPA VDSFPPRDAA APALLEGRNF 
AAELMAHLDL IANLSLDDSS DQCIPKVIES LQGIPMVGAS AGHRHSLLLS QEGALYSCGA 
GSGGCLGHGD TQSQMHPVRI TAFDEPEEDG SERTRILQMS AGVDISMAVS TRGSVYGWGK 
TDGGRIGLGM ARNQVTLPRR VSVYREEDGS PVLAVDVECG YVHSIVVGLD GTIHMCGGVG 
VEGEADGQEQ NEESKSATVG KARAVPDFNV WHRLPEPKEH APKERWKKFG KYEVKGRRQM 
LEQTADS