Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_30977 |
Symbol | |
ID | 7198881 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | + |
Start bp | 374714 |
End bp | 376362 |
Gene Length | 1649 bp |
Protein Length | 353 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185024 |
Protein GI | 219129708 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.168378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAACGCTTCG ATTGACCACA ATCGCCAGCC CAGCCCATCC TCATCGTCAC TCTGTTCGTC AATTTTCCGG TTCGACGGAA GCGAAAAAGC ATGTCGAAAC CGTTTGACTA CTCAAAATGG GACAACATTG AGTTGTCCGA CGACGAAGAA GATTGCCATC CCAACATTGA CAAGGAAAGC TGGTTTCGTA TGAAGCATCG ATCACGAGTG GAACGTGAAG AAAACGAAGC CAAAGACCGG GCTCGGATTG AACAGAAAGT GGGTGTCATT ATTAGCGCCC ACGGGCGTTT GCGTTGGTCG TCGCATCAAC ATGGCCCGTT TCTTGTATTG ATTCTCACCC ATAGATACTC GCCTCGTCTC CGTCACGCAG ATGCTCGAAA ACATGCAGCG GGTCCAGATT CTGAAGCACG ACCTGCAAAA AATAGCGAAA CTTCAGGCAA ACGACAGCGA TTCCGACGAC GATGGTGATG ACCTCGACGA TACCGAAGGC ATCAAGGCGG AATTGGCGGA ACTCGAATCG GAAAACATAT CTTTCCAAGC CCGCCTGGAC GAATACGAAA AGAATAAAAA ATGGAACGTA GACAACATGT TCGAAGTCAA GGAAGAGCGG ACGGTGATTA ATCCCAAGGC GGCCCAACCG ACCTATTCCG AAGCAGGCTA CGCGGAACCG AAAGAAGATT TGAAAAAGGT CTCGGAGACC ATGCGTCAAA CCCAAATTGG CGCAACGGAT GGTGAGAAAA AGCCCGCCGC CGTCAAATCG ACCGCCGACA GCGACGCCGA AGCCACCACG GCCACTAAGC CCACTCCAGC TAATACTGAC TCGGCTCCGA ACAACACTAG CAATGATACG AGTACTTCTC TTGCTACAAA ATCATCTCCA GCTGGTCCGG CACGTGATTT GGGAGCTATG GATACGTACC ACGAATTCAC CGAAAAGTAC GCCGATCTCG TGGAGCAATT CATGGCTCTC CCAGATCTCG CTGGCAGTGA GGAGTTCTTG TTGAGACATG GCGATGTACT ATTGCAAGAA AACGCCTCCA ACTATCTTCT CTTGGCCAGT CTCGAAGACG AGATGAACGG ATACCACGAC AAGATGAAAC GAACTGCTCG ACAGTCGCAG ATTATAACGA GTATTGCCGA GCTAGCCAAG ACGGTCAAGA CTCACCCGGG GAATGTCATT CGTCCTTTTT TCCAACGTTT GAAGGAGCGC CTGCACTTGG AAGAGTTTTT GGCACAAACA AAGGCCTTTC AGGAGAAAAT CGTGTCACGT GCAGTAGTGA AGAGGCAAGA AATTGACCGG GAACGGGCCC AGGAAGCCCG GAATGAAAAG GGAACATCTC TCGAAGATAT CCCACTCGAA CAGCGTTTGG GACCGGGCGG GCTCGACCCG TTAGAAGTGA TTGAAACCTT ACCACCCGGA ATGGTGGCTG CGTTCGAGTC GCGGGACGTC GAGCAATTGA AACAAGTCTT GATGGAAATG GATGCAGACG AAGCGGAAGC CCATATGAAA AGGTGCATCG ACGCTGGCTT ATGGGTGGCT TAGGCCAGGT GGCTAGTTTG CGATTTCTTC TTTACGTATC AGCGGCAACG GGTTGGGCTA AATAATATGC TTTAGAGTAA TCTCATAAGT AGAGAGTCTT ACATACGCA
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Protein sequence | MSKPFDYSKW DNIELSDDEE DCHPNIDKES WFRMKHRSRV EREENEAKDR ARIEQKVAGY AEPKEDLKKV SETMRQTQIG ATDGEKKPAA VKSTADSDAE ATTATKPTPA NTDSAPNNTS NDTSTSLATK SSPAGPARDL GAMDTYHEFT EKYADLVEQF MALPDLAGSE EFLLRHGDVL LQENASNYLL LASLEDEMNG YHDKMKRTAR QSQIITSIAE LAKTVKTHPG NVIRPFFQRL KERLHLEEFL AQTKAFQEKI VSRAVVKRQE IDRERAQEAR NEKGTSLEDI PLEQRLGPGG LDPLEVIETL PPGMVAAFES RDVEQLKQVL MEMDADEAEA HMKRCIDAGL WVA
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