Gene PHATRDRAFT_23838 details

Gene Information

• Locus tag: PHATRDRAFT_23838
• ID: 7198891
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: +
• Start bp: 340651
• End bp: 347029
• Gene Length: 6379 bp
• Protein Length: 1879 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002185018
• Protein GI: 219129695

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGGCCGGCAG GATCCGGCAA GTCCAGTCTC GTTCGAGAAC TTGCAAGCAT GTTTGCGTTT 
GACGAACACA CCGCAGCTCA CCATGACGAT CAGCTGCTAG AGATTCATGT CGATGAAGAA 
ACGGATACAA AAACTTTAGT TGGATCATAC ACTACGACCG ACGTTCCCGG CGAGTTTGAG 
TGGAGACCAG GCGCCTTGAC GAGAGCGATT CGATCTGGTA AATGGGTACT GTTGGAGGAC 
TTGGATTCTA TTCCCATTGA GATCCAGGCT TCGTTAGTGC AGTTGTTAAA AAGTAGACTG 
TTGCCACTAG GGAACGGAAA AGTCGAGCGA TGTCACCCAA ACTTTCGTCT TTTCGGAACG 
TTGACTATTC TGCCCGATGT GATTCATCCA GGATCAGTCG GTGGCAAACG AATACTGAGC 
CCCACGATGT GGAGACATAT ACGAATAGAA CCTCTGCCTC TTTCGGAGCT GAAAGAAATC 
GCTGTTTCGA TGCACAAAGA GGTCCCCGGC TTCGTTGTTG ACTGTGTTTT GAAAGTCTTT 
ACTGCCCTCG ATCAAAGTGG TCGAACAACC GCAATAGAAG ACGATTTTAT GGACGGCCTC 
CAACTCTTGA CACGGGCAAT AATTGGAAGA AATCCTTCAG TTCGGGATCT TTTTAAAGTT 
CTGTCGCGCA TAGCGCACAA CGTTGTGTTT GAATCCGGTG TGAGCTATGC AACAGAAGGC 
CAAAGAACCC TTTGCTTGGC CGAAACGTAT GATATTTTTG TCGCAGCTTG CCCTGATCGG 
AATTTTAAAG AAGAATGTCT CAGAAGTATT TTTGCACCAA CTTGGGGGGT GTCGGCTGAC 
TTGGCTCTAT CTTACATTGA TAGAAGGCGG CCGGAACCTG TAGTTTACCC AGCGTACACT 
GAAGTTGGTA GAGCAAGAAT ACCTATTCCT GAGCTTTATA TTCGGCCGAA CACTGACAAA 
GAAACGTTTG CTCAAACAAG CTATGCTCTT CGCTTGATGG AGTCGATCGG AGTCTGTATC 
GCGGAAAATG AGCCAACTCT TTTGGTCGGT GAAACCGGCT GTGGGAAGAC AACAATCCTA 
CAGCATCTCG CGAGACTTTC TGGAAGAGAT CTTGTTGTAC AAAATCTCTC TTTGCAAACC 
GATTCAACAG ATCTTCTCGG TGGATTTCGA CCGCTGGAGA TACAGCAGGT GGCTCGAAGT 
GTATACCAGA ATTTTGTAGA CCTTTTCACG TCTTCTTTCT CTAGAAAGCA GAACGCTGAT 
TTCCTGGCAT TTACCTCTGA TGCAATGAAA AGAGGGAACT GGAAAAGATT GTCTCAATGC 
TTCAGAAAAG CAGCCAAGCT TGGAATAGAT AAGGTCAAAG AACGAAGCTG GGATTCCGAA 
TCGTCTTCGG TGGCAGCTTC CTGGAGACGT TTTGAGAAGA GCACTGGGCG TTTCGAGCAG 
CAACGACTTG CTTGCAATTC AGGGTTGGCC TTTGTCTTCG CGGAAGGTGC GCTAATAGAG 
GCTATTACAA GAGGGAAGTG GGTATTGTTG GACGAGATCA ACTTGGCCAG TTCGGAAACG 
CTTCAAAGAT TGTGCGGGCT GCTTGATGAT CCGACCAGCA GTATCACTTT GACCGAAAGA 
GGTGATGGTG AACCCGTCGA ACGGCACCCT GACTTTCGGT TATTTGCAGC AATGAACCCA 
GCAACCGATT CAGGAAAGAA AGATCTGCAC GCTAGTATCC GGTCTCGATT TACAGAGTTG 
TACGTAGACG AATTGCTCGA TCCGCTGGAG CTAAGGGTGG TTGCCGAACG CTACATTTGT 
GCAGTTCTTC CGGTGACTGA CACACCTCCT GAACACACGG AGACTGTGGT CAAGGCCGTT 
GATGTATATC TCGAATGCCG TTCACTCGCG GAACGTGTCT TGGTCGACGG CAGTGGTCAA 
AAACCTAGAT ACACTCTTCG CACTCTATCA AGAGCCTTGA CTGCATCCCA AATCTACGTT 
CTTCAGCAAA AGCTCCCACT CCAGCGAGCA CTTTATGAAG GCTTTGAACT TGCATTCCAG 
GGCCCGCTAA GTCAGACTTC ACTGAAACCT TTTTGTGATC TTCTCACCCA AGCATTTGCT 
TCCGGGTTGA AAAAGGAAGA GATGGATCAT CCCGGTCGTC GACCAGGAGG AACCGCTGCA 
GTAGATCGCT TCGCACTAAT TAAACCTTTT TGGATTGAGA AAGGTCCCCT GGAGTCGATA 
GATTGGTCGG AGCTCAACAG TAATGCCAGG TCAAAGTTTG TTTTGACACG GAGCACCACT 
AACAATTTAC GTCGACTCGC CCGGGCAGTA GCATCAGGGC CTTGGCCGAT TCTTTTGGAA 
GGGCCCACTA GCGCCGGGAA GACATCCTTG GTGGAATACT TAGCGGCACG TTGTGGTCAT 
CACGTTATTC GTATTAACAA TCACGAACAC ACCGACGTGC AGGAGTATAC GGGGAGCTTT 
GCCGCCGACT CGAGTGGTCG TCTTGCTTTT CAAGACGGCT TACTCGTTCG GGCATTGAGA 
GAAGGTCACT GGGTTATTTT GGACGAGTTG AATTTGGCAC CAAGTGAGGT ACTCGAGGCC 
TTGAATCGTC TTTTGGATGA CAATAGAGAG CTTTATCTCC CTGAAACCAA CGAGACTGTC 
CGTCCTAAAC ATGGATTCAG GCTTTTTGCG ACACAAAACC CAAGCGGCGT ATATGGAGGC 
AGAAAACCGC TTTCTAGGGC CTTTCGAAAT CGATTCACTG AACTTCACTT GGACGATATT 
CCTAGTAGCG AAATGATTAC CATTCTAGAG AAACGGTCCG GATGTCCACC TCAACACGCC 
AAGATTTTAG TCTCAATCAT GGATGCTCTT CGACTGAAGC GTAGTAAAAG TGGAGTGTTC 
TTGGGAAAGA ACAGCTTCAT TACTCCACGG GACCTGTTGA GGTGGGCAGA GCGACATGCA 
ACCGGGAAGA TTGAACTAGC CCACGAAGGT TTCATGCTTT TGGGAGAGCG GTTGCGGACA 
AGGGAAGAAA AGGATTGTGT CCGAGAAGAA ATTGAGAAAC ATCTAAACGT AAAAATCGAC 
CTGGAGACAC TCTACTTCAG TGAGTCCTCG GAAGCGAGAT CAGTTCTCCA CCGTCTGTTC 
ACTAAATCAT CCGATCCGAA TAATCAGAAA CTGTTAGCTA CGATCGCCCC GACGAGGTCT 
TTGCTGAGGC TAGTCACGTT GGTGCTCCGC TGTGTCAGGC AACGTGAACC AGTTCTTCTC 
GTTGGAGGTA AGCGGAAGGG AAACCCCTTT ATTGTTCTTT TGCCGTTACG TATGTATCTC 
AAATACCGAT TCTTGTAGAT ACGGGATGCG GAAAAACAAC AGCGGTTCAG CTTCTCAGTT 
GTGTATTGGA GTCCGAACTT CATACCATCA ATTGTCACGC CACAACCGAA ACCTCTGACC 
TTTTAGGTGG GTTGCGGCCT GTTAGAGGTC GTCCAAGGCT GGTTCGAAGA ATGCTGGATG 
CGACAGTAAA TCTCTGTGGT TGTTGGCCAC AACGCGATGC TATTGCTTTA CAATCAATTC 
CCGGATTCGT CAATGAAGAA TTGGCAAAGA CCACAAAAGC ATCGGAGGTC TATACCGGAA 
TATTACCAGA TGATGCAGTC GACCAAATGG TTGAACTAGC GAGGGCCTTG TGGAAATCAC 
GAAGTGGGAT TATTCAATCG GAGCCTTCCT CTAGACGGGC GAAACGTCAA AAAGTAGACG 
GAAAGGAATC TCCCAGTAGT AGTTTTGAGC GTGACAATTG GGATCAAGTT TCGTGCCTTG 
TCAAGGAAGT CGAAGATCTG GCTCGGGCAT ACAATGCTTT GTTTGAATGG TCCGATGGTC 
CGCTTGTGAA AGCGGTCAAG GCTGGAGATA TGATCCTGCT CGATGAGATA AGTCTTGCCG 
AAGATGCAGT TTTGGAGAGA CTGAATTCGG TGTTGGAACC ATCGCGCACC CTCGTTCTGG 
CGGAGAAAGG CTCAGCAGAC GACGTTGAGA GTCGAGTTCT CATCGCGCAC GAATGCTTTC 
AGCTTTTCGC GACCATGAAT CCTGGGGGGG ATTTTGGAAA GCGTGAGCTC AGCCCGGCAC 
TTCGAAGTAG ATTCACAGAA ATTTGGGTAC CTGCTGTTAC GGATAGTGCC GATATTGATT 
TTGTCCTAGA GCGCTCCCTA GCACAAAGTG CTTTCGAGGA AGGGACACGA AATGACGTAA 
AGCGGAAAAT GATAGAATAC TTCAACTGGT TCAATGAACA CCTCTGTACC GATCCTTCGC 
GTCCCTATGC CGAACTGGCG CTTTCTCTCC GTGACATCTT GACGTGGGCA GCTTTTATTA 
CAGCTTGCAC GCAGGCTGGC GACGACCTTG ACATATGGGG AATATACTAC CACGGCGCTT 
GTCTTATGCA TTTGGATGGG CTGGGACTCG GAACTGCACT TGCCTCGCAC GATTCCGCAT 
CGGCCAAAAA TAAAGCCATT GAATTCTTGA TGGAACATGT TCCAGTAGAT AAAAGGTCAA 
CGCTTGGTGT GATGACGAAT GGCTTCAATG TTCTGGATGC AAAATTTGGT TGCAATACTT 
TCCGTATTCC GGTCGGTCAA GATCATGTTG CGGAAGCTGA CTTCAACTTG GAGGCTCCGA 
CTACATCTGT AAATATTTTC CGAATTCTCC GGGCAATGCA ACTTTCAAAG CCAGTACTGC 
TCGAAGGATC CCCGGGGGTG GGAAAGACGA CGCTTGTGGC TGCGCTGGCA GCAGCTTCCG 
GGCATAAGCT TGTGAGAATC AACCTTTCCG ACCAAACCGA CATTTCCGAT TTGTTCGGCA 
GCGATCTCCC TGTTCCGGAA AAGGATGCGT CCGGGAATAA CTCAGCCTCC TTTAGTTGGT 
GTGACGGCGT TCTACTGTCC GCTATCAAAA AGGGAGACTG GGTGCTATTA GATGAATTAA 
ACCTAGCGTC TCAGGCGGTG CTGGAAGGTC TGAACAGCTG TCTCGACCAT AGAGCAAGTG 
TTTACATTCC GGAACTAGGT AGTTCTTTCA GATGTCCTGC GTCCTTCCGA ATTTTTGCCG 
CACAGAACCC GTTGGCACAA GGTGGAGGGA GGAAAGGCCT TCCTAAGTCG TTTTTGAATC 
GGTTCACCAA GGTTTTTGTT GATTCTTTAA CAGACGACGA TCTTCGCGTT ATTTTGACAG 
CAAAATTTCC ATCATTGGAT GAAAAGCTCA TCGACCGTGT GATTGCATTT AACAGTCGGA 
TAAACTGTGA TGTTGTTCAA GATCGCCTGT ATGGTCAGTC CGGTGCACCG TGGGAGTTCA 
ATTTGAGAGA CGTTTTTCGA TGGTGTGAGC TGCTACGATT TGATCTTTTC GGGCAAATAT 
CAATTTCCCT TCCTCTGGTG CTTGCCCGAG ACCTGTATTT TCAACGTTTC AGAGCACAAC 
ATGACCGGGA AATTGCGAAA GAACGTTATC TGTCAATCTT CGGATCCGTG GATCAGAAGG 
ACCCCAGATG TAAACTAGCA ACGACTCCGC TCGAAGTCCT TGTGGGTAGT GTCAGATTAG 
CACGGTTGCG AGGTCCGGAT ATCACACGCG GTCCCTATGT CGTAGAGAGT CCGCTTTCGC 
TCATTCACTT TCAAGCACTC GAAGCGGTAG CTCGATGCAT TTCAAAAAAT TGGCCTTGCC 
TACTTGTAGG GCCGGCGGTA GTGGGGAAGA GCTCGACAAT TGGTTGCCTC GCCGAATTAA 
CAGGGCGAAA GCTAGTCGAG ATATGTCTGT CTCCATCCTC TGACGTTTCT GAGCTTGTGG 
GGTGCTTTGA GCAAGTTGAT GGACTTGAGG ACTACAGGGT AGCGTTCGCG TCTATCTGCC 
GTGTGGCTGA GGAATATCTG CTGCTTGGCG GATCGGAGAC TGAAAAAGTA TGCGATTTAC 
TCAATTCGAT CCGATCGGCA GACGACGAAG TAGAGGGTAT GCGTTTTGCG CAGCACATTG 
CGTCTCTGCT TTTTACAGAG CTCAGATCTA GAGTCGATCT GAACCCCATC GTATGGGATG 
ATCTGGCGGC TTCTCGCGAT CTTTTGCTCA ATTACAATGG AAAAATGTCA ACGATAGGCG 
GTCACTTTGT TTGGAAAGAC GGTATTCTTA TCGAAGCGAT GGAAAAGGGT TACTGGCTTC 
ATTTAAAGCA TGTCAACCTT TGCCCAGCTT CGGTGCTTGA TCGTTTGAAT TCTGTGATGG 
AACCAAATGG AAGTTTGTTG TTGGCAGAGT GCAGTTCAGC GGGGGAGGAC GGAGGAACAA 
GGCATCGTCA AGTCCATTGC CACCCTGACT TTCGGATCTT TCTCTCTATG AATCCTGAAT 
ATGGGGAGGT TTCAAGGGCG ATGCGGAACA GATGCGTGGA GATAGCGTTG ATGGACCACC 
CGGCTCTGGC ATATGAGGG 

 

Protein sequence

MFAFDEHTAA HHDDQLLEIH VDEETDTKTL VGSYTTTDVP GEFEWRPGAL TRAIRSGKWV 
LLEDLDSIPI EIQASLVQLL KSRLLPLGNG KVERCHPNFR LFGTLTILPD VIHPGSVGGK 
RILSPTMWRH IRIEPLPLSE LKEIAVSMHK EVPGFVVDCV LKVFTALDQS GRTTAIEDDF 
MDGLQLLTRA IIGRNPSVRD LFKVLTLCLA ETYDIFVAAC PDRNFKEECL RSIFAPTWGV 
SADLALSYID RRRPEPVVYP AYTEVGRARI PIPELYIRPN TDKETFAQTS YALRLMESIG 
VCIAENEPTL LVGETGCGKT TILQHLARLS GRDLVVQNLS LQTDSTDLLG GFRPLEIQQV 
ARSVYQNFVD LFTSSFSRKQ NADFLAFTSD AMKRGNWKRL SQCFRKAAKL GIDKVKERSW 
DSESSSVAAS WRRFEKSTGR FEQQRLACNS GLAFVFAEGA LIEAITRGKW VLLDEINLAS 
SETLQRLCGL LDDPTSSITL TERGDGEPVE RHPDFRLFAA MNPATDSGKK DLHASIRSRF 
TELYVDELLD PLELRVVAER YICAVLPVTD TPPEHTETVV KAVDVYLECR SLAERVLVDG 
SGQKPRYTLR TLSRALTASQ IYVLQQKLPL QRALYEGFEL AFQGPLSQTS LKPFCDLLTQ 
AFASGLKKEE MDHPGRRPGG TAAVDRFALI KPFWIEKGPL ESIDWSELNS NARSKFVLTR 
STTNNLRRLA RAVASGPWPI LLEGPTSAGK TSLVEYLAAR CGHHVIRINN HEHTDVQEYT 
GSFAADSSGR LAFQDGLLAL NRLLDDNREL YLPETNETVR PKHGFRLFAT QNPSGVYGGR 
KPLSRAFRNR FTELHLDDIP SSEMITILEK RSGCPPQHAK ILVSIMDALR LKRSKSGVFL 
GKNSFITPRD LLRWAERHAT GKIELAHEGF MLLGERLRTR EEKDCVREEI EKHLNVKIDL 
ETLYFSESSE ARSVLHPTIA PTRSLLRLVT LVLRCVRQRE PVLLVGDTGC GKTTAVQLLS 
CVLESELHTI NCHATTETSD LLGGLRPVRD LARAYNALFE WSDGPLVKAV KAGDMILLDE 
ISLAEDAVLE RLNSVLEPSR TLVLAEKGSA DDVESRVLIA HECFQLFATM NPGGDFGKRE 
LSPALRSRFT EIWVPAVTDS ADIDFVLERS LAQSAFEEGT RNDVKRKMIE YFNWFNEHLC 
TDPSRPYAEL ALSLRDILTW AAFITACTQA GDDLDIWGIY YHGACLMHLD GLGLGTALAS 
HDSASAKNKA IEFLMEHVPV DKRSTLGVMT NGFNVLDAKF GCNTFRIPVG QDHVAEADFN 
LEAPTTSVNI FRILRAMQLS KPVLLEGSPG VGKTTLVAAL AAASGHKLVR INLSDQTDIS 
DLFGSDLPVP EKDASGNNSA SFSWCDGVLL SAIKKGDWVL LDELNLASQA VLEGLNSCLD 
HRASVYIPEL GSSFRCPASF RIFAAQNPLA QGGGRKGLPK SFLNRFTKVF VDSLTDDDLR 
VILTAKFPSL DEKLIDRVIA FNSRINCDVV QDRLYGQSGA PWEFNLRDVF RWCELLRFDL 
FGQISISLPL VLARDLYFQR FRAQHDREIA KERYLSIFGS VDQKDPRCKL ATTPLEVLVG 
SVRLARLRGP DITRGPYVVE SPLSLIHFQA LEAVARCISK NWPCLLVGPA VVGKSSTIGC 
LAELTGRKLV EICLSPSSDV SELVGCFEQV DGLEDYRVAF ASICRVAEEY LLLGGSETEK 
LRSRVDLNPI VWDDLAASRD LLLNYNGKMS TIGGHFVWKD GILIEAMEKG YWLHLKHVNL 
CPASVLDRLN SVMEPNGSLL LAECSSAGED GGTRHRQVHC HPDFRIFLSM NPEYGEVSRA 
MRNRCVEIAL MDHPALAYE