Gene PHATRDRAFT_23830 details

Gene Information

• Locus tag: PHATRDRAFT_23830
• ID: 7198959
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: +
• Start bp: 317127
• End bp: 319215
• Gene Length: 2089 bp
• Protein Length: 497 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002185010
• Protein GI: 219129679

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.028524
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTCGAAGAGA CCTCACGACA GAGAGAAGAA GGCAAACAAA TCGACTTATG TTCGTTTTCT 
TTGCATCTTC GAGATTCATG CCGAGGAGTC GCTTTTCTAG CGCTTCACTG TCATGCAACA 
GGTAAACTCG ATTGATGGCT GCCTGAGTCT TCCTCGAATT CTCTTTTCCA GCATGAAATC 
TTTGGCCGGA AATCGATTTT ACCGGTCTAT TTGACTTTTT TTCAATGATA GCCCTGAGTG 
AATTTTAAAG ATCCGATACC GCAGAGAGCT CTTGGATACA ATGCGAACTG TTCCAGACAT 
TGCGATGATT GAAAAGTGGA AAAGTCGTCA CCTGAAGGGG AGCTTATAAA ACGACAGCCA 
CTCTTCAACG ATCTTCCCGA AAAGCTAGCT TTCCATTTTG AGACCGATAT CATCATGAGC 
GTTGACATGA GTCCTTTTCT TTGGATAGCC GTCCTCGGAG GTATCTGTGG CTTTGGTTAC 
GGGTTCTTTA TCGGCGCGAA CGACGTTGCA AACGCTTTTG CTTCTTCCGT GTCCTCCAAG 
TCTGTAACTT TGAAGCAAGC CGTCATCATC GCTAGTATCT TCGAGTTTTC GGGGGCCTTT 
TTTCTCGGAG CTTCTGTTAC GGGTACAATT CGATCCAAGA TTATCGACAT CAACCTCTAC 
ATTGACGAGC CTGAGCTTCT CATGTTCGGT ATGTTCACGT CCTTGCTCTC GGCCGTCATT 
ATGTTGGCCA TCGCGACACG ATTCGGTCTC CCCGTGTCCA CTACGCACGA CATTGTTGGC 
TGCATCATGG GCTTTTCAAT TGCCGCCAAA GGCTTCGACT CGGTAGACTG GGATGTGGCT 
CGCAAGCTGT TCATGTCGTG GGTCGCATCG CCTTTGATCT CGGGTTGTGT TGCTGCCTTT 
CTGTTTGGAA TGGTCAAATA TTTTGTAATG AAGACGGACA ATCCCTACCA GCGAGCCTAC 
TACACCTTCC CCATTGTTCT TACGATTGGA CTCGGTATTG ATATCTTCTA CATTCTGTAC 
AAGGCGAGTT CCAATTTTTC GGGATTTTCT GACAAACTCG AGCTGTACTG GGTTCTTCCT 
ACATCCTTTG GTATTGGTCT CTTTGCTGGT ATCTTGTGGA TCTTCGTATT TGGTCCTTGC 
GCCAAGAAGC GTGTTGAACA TTTGAAGATC ACGAGGGACG AGGCTGAGCA CGAAGCTACT 
ACTTGCGATC CCGAATCAAC TCCGGGATCT ATAGCTGAGG ATCGCAAAGC GTCAAACAGC 
CGCGAGGAGA TTCACGATCT CGATGACAGC GGGCATCCCA TGAAGGAGTC GACCGACGAA 
CCAAGTTCAG AAGAAAAATC GCCCTCGACC ATCGTCGATA ACCTCAAGCT CTTGTCTAAA 
AAATTTGGAG ATTCTACTTA CAACCAAGAT CTCCATGCTC AGTCTATGCA TGAGAATCCC 
CGCACAGCCG AGATTTGGGA GCAGGGTGAA GTCTACGACC CGGATGCAGA AATGCTCTTT 
TCATACGTCC AGGTCTTCAC TGCTTGCCTA AACTCTTTTG CCCACGGTGC CAATGACGTG 
TCCAACACGA TTGCTCCTTT GAGTGCCATT ATCCAGCTCT ACCAGGATGG TGTTGTTGAG 
AAGAAATCGG AAGTTCAAAA GTGGGTTCTC GCTTATGGAG GCATTGCCAT TGTTCTCGGT 
CTCGCTCTCT ACGGATACCG TGTAATGAAG TCGGTCGGCT ACAAACTGAC TCGCTTGTCC 
CCTTCGCGCG GCGCTTCAGC CGAGCTTGCC GCTTCGTTGA CAGTTGTGAC CGCTTCTTTT 
CTCTCGATTC CAGTGTCGTC GACCCAGTGC ATCGTTGGCG CCGTCTCGGG GGTTGGTTTG 
ATTGGCGGCT GGAAGAATGT CCAGTGGCTC TTCCTTGCCC GTGTTTGTGT TGGATGGGTC 
GTGCTGTTCT TTGTCGCGGT GTTGCTCTCG GCTGGGGTCT TTTCCTTTGG AGCTTTTTCC 
CCCTCTGCCT GAGACAGCTT GCGCATGCCC ATGCACTGGA TCCGTTTAAA CAATGGGTAG 
AATATCCCAA TTTGAGTAGC ACTTAAAATA ATTCCATGAA TATATATGC 

 

Protein sequence

MSVDMSPFLW IAVLGGICGF GYGFFIGAND VANAFASSVS SKSVTLKQAV IIASIFEFSG 
AFFLGASVTG TIRSKIIDIN LYIDEPELLM FGMFTSLLSA VIMLAIATRF GLPVSTTHDI 
VGCIMGFSIA AKGFDSVDWD VARKLFMSWV ASPLISGCVA AFLFGMVKYF VMKTDNPYQR 
AYYTFPIVLT IGLGIDIFYI LYKASSNFSG FSDKLELYWV LPTSFGIGLF AGILWIFVFG 
PCAKKPEDRK ASNSREEIHD LDDSGHPMKE STDEPSSEEK SPSTIVDNLK LLSKKFGDST 
YNQDLHAQSM HENPRTAEIW EQGEVYDPDA EMLFSYVQVF TACLNSFAHG ANDVSNTIAP 
LSAIIQLYQD GVVEKKSEVQ KWVLAYGGIA IVLGLALYGY RVMKSVGYKL TRLSPSRGAS 
AELAASLTVV TASFLSIPVS STQCIVGAVS GVGLIGGWKN VQWLFLARVC VGWVVLFFVA 
VLLSAGVFSF GAFSPSA