Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16599 |
Symbol | |
ID | 7198819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | - |
Start bp | 25248 |
End bp | 26132 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185030 |
Protein GI | 219129720 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00376153 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGAGT CAGACTACAG CACGCTGCTA CCGAAAATAC TTATAGAAAC GACTGTCAAA CAATGGATTG CCGACGATAT CCCTTCATTT GATGTCGGCG GTCTCGTTGT TGGCGACGGT ACTCGAAAGG CAACTCTCTG GCTAAAATCT CCCGGTGTTT TTGCAGGAAA ACCTTTCTTT GATTCAGTGT TTGAGCTTTT GGGATGTGTG GTGGAATGGA ATTCGGATGC TGCGATCGAA GGCAACTTTG TGAATGCTTC GTCAAACCAC AAAATCAGGC TTGCTGTGGT CACAGGCCCT ATTCACAAGA TCTTGCAAGG CGAACGTACG GCGCTCAACA CGTTATCCCG GTGCTCCGGA GTAGCATCAG CGTCGTATGA AGCTGTCCAA CTTGCCCGCA AAGCCGGCTG GAAGGGATGG GTTGCAGGAA CGCGGAAAAC AACCCCAGGG TTCCGTATTG TAGAAAAATA TGGGCTTCTC GTCGGCGGCG CCGCGACACA CCGGCTGGAT CTTAGCCAAA TGGTAATGCT GAAGGATAAT CATATTTGGT CGGCTGGTTC AATAAGCGCG GCAGTTCAGC GTGCTCGCCA AGCCGCTGGA TTTTCGCAAA AGATTGAAGT TGAATGTCAA AATCTGGAAG AGGCGATTGA GGCTTCCAAA GCAGGGGCGG ATATCGTTAT GCTGGACAAT TTTGAACCAG AGAGACTCAA AATTGATGCA AAATCTTTAA AGGAAAAGTT CCCGCATATT CTGATCGAGG CCAGTGGTGG AATTACTACC GAAACAATGC ACTTGTATCT GTGTGACTCC GTCGATATTG TTTCCCAAGG AAAGCTCACG CAAGGATATT CATGTTTGGA TTATAGCTTG AAGGTGCAAC TGTAA
|
Protein sequence | MAESDYSTLL PKILIETTVK QWIADDIPSF DVGGLVVGDG TRKATLWLKS PGVFAGKPFF DSVFELLGCV VEWNSDAAIE GNFVNASSNH KIRLAVVTGP IHKILQGERT ALNTLSRCSG VASASYEAVQ LARKAGWKGW VAGTRKTTPG FRIVEKYGLL VGGAATHRLD LSQMVMLKDN HIWSAGSISA AVQRARQAAG FSQKIEVECQ NLEEAIEASK AGADIVMLDN FEPERLKIDA KSLKEKFPHI LIEASGGITT ETMHLYLCDS VDIVSQGKLT QGYSCLDYSL KVQL
|
| |