Gene PHATRDRAFT_16592 details

Gene Information

• Locus tag: PHATRDRAFT_16592
• ID: 7198916
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: +
• Start bp: 83116
• End bp: 83679
• Gene Length: 564 bp
• Protein Length: 187 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002184964
• Protein GI: 219129583

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00540575
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGATAC CTTTGGCTAA TTTTGGCAAG GCATACGCTA GTTCACTGGA TGCCCGACCC 
ATCTTGACCA AGAGTGTTAC GGCGGGCTGT ATTTTTGCAG TCTCAGACTA CCTGGCACAG 
CGATTGGAAT CATCCGGAAG TCGCGAACGA AAAATCAATC CTACCAGGCT GCTCACATCA 
GCCGCCGTCG GATTGTTTTA CTTCGGACCC GCCGCACACG CGTGGTACAA TATGATATTC 
CAACTGCTTC CAGGGACTTC CCTTGTTTCG ACGCTACAGA AAGCTGTCAT GGGACAGTTG 
TTCTTCGGAC CATCATTTAC ATGCATCTTT TTCGCGACGA GCTTGATGCA ATCAGGAAAT 
TTTACAATCG CGAATTGGCT GCGGAAGATT CGGCAAGATT TGCCCGGAGC ATGGCTGGCA 
GGGGCTAGCT TTTGGCCTCT GGTGGATCTG GTCAGCTTTT CAATGATTTC GAAGGAATGG 
ATTCCGCTAT TCGTAAATAT GTGCTCGTTG GTCTGGACAA TTTATCTATC CAGTATTGCT 
AATCGGGGAA GCAAGTCAAG CTAG 

 

Protein sequence

MAIPLANFGK AYASSLDARP ILTKSVTAGC IFAVSDYLAQ RLESSGSRER KINPTRLLTS 
AAVGLFYFGP AAHAWYNMIF QLLPGTSLVS TLQKAVMGQL FFGPSFTCIF FATSLMQSGN 
FTIANWLRKI RQDLPGAWLA GASFWPLVDL VSFSMISKEW IPLFVNMCSL VWTIYLSSIA 
NRGSKSS