Gene PHATRDRAFT_50084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50084 
Symbol 
ID7198761 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp352627 
End bp353976 
Gene Length1350 bp 
Protein Length260 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184868 
Protein GI219129380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCGAGTACC CAATTCGGTT CCGGCACGAT CCATCCGACA CCGACGCGGT TCCCAAGCAC 
CATGGATACT CTGTCGACGG GCACCCCTGC CTATATGGCC TTGTACCCGA CGCAATCGAC
TGATGGAGGT ACGTGGGATA CGCGCGCACA CACGTATGTA TACTGTCGGG GGAGAGGGGG
TCTCCTCACT GGGGGACCGC ATCCCGACAC GGCACTACAC ACCGGTGTAC CTTCTTCTCC
AACATCACGG GTGGCGTGGC AGCAATGTCA TCACGTCGCC ATTACCCGAG CTCGTTCCAT
TGAACCGTTC CCACTGTAGA AGTGCCCGAT TGTTCTTTAC TCACACAGCC TTGCCCATTG
CTGCAACCCA ATTTGAACTC GTGGACCAAT TCTAGTTTTG CGACTGGGGA ATATCGTCCC
CGATTTTCGG GCGGATACGA CGCACGGGGA AATGGCGTCC TTTCACGAGT GGAAAAAGGG
CAAGTGGGCC ATTCTGTTTT CGCATCCGGC TGACTTTACC CCCGTTTGCA CCACCGAAAT
TGGACGCCTC GCGCTCAAGT ACGACGATTT GCAACGTATG GACTGTCTCG TGGCGACCTT
GTCCGTGGAT CCGGTCAAAT CGCACCAAGA ATGGCTCCAG GATGTCGTCG CCCACTGTGA
AAACGAAATT GAAGTAAGTC GACATTCTGG GACAAATCTG TGTGCGTGTG GCGTCCTGGA
TCCTTTGGAC TGTTCTGCTC TTGCACCAAA CGAAATCAAC ACCCCACACT ACACATCCTG
GCACACAATT ACATACACAC TCACACCATT TACCCTCAAT TTACCCAAAG GTCAAGTTTC
CGATTATCGG TGACGCCGAC CGTTCCATTT CCACCGCATT TGGCATGTTG GATGCGGGCA
ACTCGGACGA GCAGGAACTG CCCTTGACGA TTCGGGCCGT CTTTATCATC AATCCGGAAA
ACAAGCTCAT GTTGAGTTTG AATTACCCGG CCTGCGTCGG CCGCAACATG GACGAAATAT
TCCGGTGTGT CCAGGCCCTC CAGTTGTCGT ACGAAAAGTC CATCGCGACG CCGGCCAATT
GGCCCCACAA TCACTCGGAC ATCCCCATGC CGGACGGGAG CCGCTCAGGC GACTTTGCCG
GTTCCGTCTT TTTGTTGCCC ATCGTGAGTG CGGAAGAGGC CGACGCTCGA TATCCCGGAT
ACCACACCTG TGATGTGCCG AGCAAAATTC CCTATTTGCG TCTCGTCAAG AAAGAGCAAG
TCCAGTAAAA AGCGCATCCT CGCCGTTGGG TCAAGTATTC ACAGACACTT CTTATAAATA
ACGTATCGAT AACACGGATC CGTCTTCTTT
 
Protein sequence
MDTLSTGTPA YMALYPTQST DGVLRLGNIV PDFRADTTHG EMASFHEWKK GKWAILFSHP 
ADFTPVCTTE IGRLALKYDD LQRMDCLVAT LSVDPVKSHQ EWLQDVVAHC ENEIEVKFPI
IGDADRSIST AFGMLDAGNS DEQELPLTIR AVFIINPENK LMLSLNYPAC VGRNMDEIFR
CVQALQLSYE KSIATPANWP HNHSDIPMPD GSRSGDFAGS VFLLPIVSAE EADARYPGYH
TCDVPSKIPY LRLVKKEQVQ