Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50084 |
Symbol | |
ID | 7198761 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | + |
Start bp | 352627 |
End bp | 353976 |
Gene Length | 1350 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184868 |
Protein GI | 219129380 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCGAGTACC CAATTCGGTT CCGGCACGAT CCATCCGACA CCGACGCGGT TCCCAAGCAC CATGGATACT CTGTCGACGG GCACCCCTGC CTATATGGCC TTGTACCCGA CGCAATCGAC TGATGGAGGT ACGTGGGATA CGCGCGCACA CACGTATGTA TACTGTCGGG GGAGAGGGGG TCTCCTCACT GGGGGACCGC ATCCCGACAC GGCACTACAC ACCGGTGTAC CTTCTTCTCC AACATCACGG GTGGCGTGGC AGCAATGTCA TCACGTCGCC ATTACCCGAG CTCGTTCCAT TGAACCGTTC CCACTGTAGA AGTGCCCGAT TGTTCTTTAC TCACACAGCC TTGCCCATTG CTGCAACCCA ATTTGAACTC GTGGACCAAT TCTAGTTTTG CGACTGGGGA ATATCGTCCC CGATTTTCGG GCGGATACGA CGCACGGGGA AATGGCGTCC TTTCACGAGT GGAAAAAGGG CAAGTGGGCC ATTCTGTTTT CGCATCCGGC TGACTTTACC CCCGTTTGCA CCACCGAAAT TGGACGCCTC GCGCTCAAGT ACGACGATTT GCAACGTATG GACTGTCTCG TGGCGACCTT GTCCGTGGAT CCGGTCAAAT CGCACCAAGA ATGGCTCCAG GATGTCGTCG CCCACTGTGA AAACGAAATT GAAGTAAGTC GACATTCTGG GACAAATCTG TGTGCGTGTG GCGTCCTGGA TCCTTTGGAC TGTTCTGCTC TTGCACCAAA CGAAATCAAC ACCCCACACT ACACATCCTG GCACACAATT ACATACACAC TCACACCATT TACCCTCAAT TTACCCAAAG GTCAAGTTTC CGATTATCGG TGACGCCGAC CGTTCCATTT CCACCGCATT TGGCATGTTG GATGCGGGCA ACTCGGACGA GCAGGAACTG CCCTTGACGA TTCGGGCCGT CTTTATCATC AATCCGGAAA ACAAGCTCAT GTTGAGTTTG AATTACCCGG CCTGCGTCGG CCGCAACATG GACGAAATAT TCCGGTGTGT CCAGGCCCTC CAGTTGTCGT ACGAAAAGTC CATCGCGACG CCGGCCAATT GGCCCCACAA TCACTCGGAC ATCCCCATGC CGGACGGGAG CCGCTCAGGC GACTTTGCCG GTTCCGTCTT TTTGTTGCCC ATCGTGAGTG CGGAAGAGGC CGACGCTCGA TATCCCGGAT ACCACACCTG TGATGTGCCG AGCAAAATTC CCTATTTGCG TCTCGTCAAG AAAGAGCAAG TCCAGTAAAA AGCGCATCCT CGCCGTTGGG TCAAGTATTC ACAGACACTT CTTATAAATA ACGTATCGAT AACACGGATC CGTCTTCTTT
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Protein sequence | MDTLSTGTPA YMALYPTQST DGVLRLGNIV PDFRADTTHG EMASFHEWKK GKWAILFSHP ADFTPVCTTE IGRLALKYDD LQRMDCLVAT LSVDPVKSHQ EWLQDVVAHC ENEIEVKFPI IGDADRSIST AFGMLDAGNS DEQELPLTIR AVFIINPENK LMLSLNYPAC VGRNMDEIFR CVQALQLSYE KSIATPANWP HNHSDIPMPD GSRSGDFAGS VFLLPIVSAE EADARYPGYH TCDVPSKIPY LRLVKKEQVQ
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