| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50075 |
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| Symbol | |
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| ID | 7198757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011694 |
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| Strand | + |
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| Start bp | 317396 |
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| End bp | 320387 |
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| Gene Length | 2992 bp |
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| Protein Length | 955 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184860 |
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| Protein GI | 219129363 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTCG AGAACGGAGA TGGAACGAAC GGCAGTAGGA GCGAAGAAAT CGGGGCAAAG
GCTGCTCCCC ACGCGACTAC GTCGACAGAC AATCGCACAG CATCGTTCAC TTCCACATCG
TCACCACCAT CCTTTGCTCC ATTTCAATCC CAACGAAGCG TTCAGCATAA GAGCAGCTAC
GATGTGTCCA AGTCCATGGA ACGGCTTCGA TCTTCAATGA TTGGTAATGT ATCGTGGATT
CCTGGTCGTC ACGAGAAGGA GGACTACGAT GAACTTGGTC AAGTACCGAC CACAAGGACT
TCAACGACAA CTACTGCATC ACCAGCTACG CCCTTGCCTC CAAGTTTACA CCGCGCGTTG
GGACAGATAC CAGCAATCGT GTTGATTGGC ATATTTCATC TCATGATTGG AATCCCCTTT
GGTGCTTCTT ACTTTCCAAT TGGTTGGAAG GCTCCTGGGA GTGCCGACGA CGAAGACGAG
AATGATGACG ACGGGGTCCA TGGAATTTTT CCGTTACCAG GCAAAGAAGC TCTGGGAATT
CGAATGTTTT TGTTCTCCAC AATCCTGGGA CAAATTGTCT TTACGGGTCT TTCTGGCTTT
CGCAATCCTG TCGGCTTACA AATGGTCGAG AACGTTCCGT TCTGTCACGA GCTGGCCACA
ATCGCCGTGC GTCATCAAGG ATACACCCGA GAAGCTCTGT CAACGCTCTT TGCCATGTAC
GGATTCTCGA GTCTGCTCGT GGGTGCGGTC TTTTATGCTC TGGGACGATG GAAACTAGGC
AACGTTGTTT ACTACTTTCC GAAACACGTT TTGGTGGGAT GCATTGGGGG AATTGGCTTG
TATATCGCCA AAACGGGTGT GGAAGTTACC AGGAATGCGG AATTCTCACT ACGGGCAGCC
ACGGTCACGT ACGGACTTTT GTTGGTCGTC GTCCTTGCCT TTGAAGTCGT CCTGCGTCTA
CTGGAATTTG GAACGCGTGA CGTTAGCGGG AACGCAAGGT ACCCATTGTT GTCGCCGTTA
TATTTTTGCA GCATTACACC CGTCTTTTAT ATGGCACTCT TTGTGCTTGG CGTGAACATT
GAGACTGCCA CGGAGGAAGG ATTCTTCTTT CCCGCATTGG ACAAATGTAC TATTGGAGGA
GGTGAAAATG GTGAAGCCTG CTCCACGTCC TTGTGGGATT CCATTTTTGA TCAGAATCTG
TTCAATATTT GGAAAGTCGT AAACTTCTCG ACAGTCTCCT TTCCCGCGCT GATGGACGCC
ATTCCGACCT TGGTCGCACT GACTTTGTTC AGTCTCATTC ATGTTCCCAT TAATATTCCC
GCCTTCGCAA ACTCCACGGA CACTGATGTA GATATGAACA AAGAACTGAT TGCTCATGGC
TACTCCAATT TGCTGGTCGG CATTTTTGGC GGCTTGCAAA ACTACATGGC CTATACGCAG
TCGGTCTTGT ACGACAAATC AGGGGGAACG GGAAAGGCCT CGGGCTATGC TGTCGCCGGC
ATTACGTCGG TGCTTTTCTT GATTGGGCCC ACCATTGCTT CCTATATTCC CCGGTGTATG
GCGGGGACCT TATTGGTCCA CGTAGGTGTG GATTTGTTTC TGGAAGGCGT TTACGAAACA
TGGGGAAAGT TCGACGCACT GGAGTACGGT GGTATTTGGC TTATAACAAT GGTCATGACA
CTGTACGGGA TGGAGGCCGC CATGATTGCC GGCTTCATCA CGGCTCTTTT TACATACGCC
GTGCAAAATA CGACGTACGT TCATATCCTG CGTGGATCCA TGTCCGCAGC TACGTTGCGC
AGTAGCAAAT GGAATCGCAG TACCCGGGCC AACGCTATTT TGGCGGACGA GTCGACCGGA
CGCAATCGTA TCCTGGTGGT CCAACTCCAG GGACACTTGT TTTTCGGCAA CATGGTGCAA
CTCACCCAGA GTGTAAACGA TGTGCTGAGT GAGAAAGCGA AGCCTCGTAC GGAACCTTGG
ATTGTGATTA TTGATTTTGG TTTGGTACTG GGGATTGACT CTTCCGCGGC ACAATCGATC
AGCAAACTAT CCAAGACACT GCAACACAAG CACGGTGTCG ATCTTTGCAT TTTCGTGACG
GGTTCTGGGG AAGGCTTTCC AACGGCCTAC AGTTTGTCCA AGGAATTGTC CACTTTATCA
TCGACCACGC CAGTGGTTGT TTCGGATGAA GACGTGCGGA CAACCGAAGC GACACCCTTA
TTGGCACCGT TCGCGACACC GAATCCCGAT ACATCATCAT CATTGTACAC GGGCAGTCGT
GTATGCACTA CGCTGGACGA TGCGCTGGTG TTTGCCGAAG ACGCGTTACT GGCGCGCACC
GATTGGTCGT TGTTGGAAGC AGACCGTCAC ATTGGCGATC CCCTCCGCGG CGGCGTGTAC
GATATCACGG ACGAAACGCG AGTGGCTTTG CGGTATTTGG AAAATCTGTG TCCACGCGGG
GTGGACCAAG CGCACGTGCG TTTGCTGTGG AAGTGCATGA CACGGGAAAC GTACGTATGC
GGCGATTCCG TGTGGTTGCA GGGTTCGGAG AGTGACTGTA TGAAACTGTT ACTGCGTGGA
ACCTTATTGG CGTCTCTCGA GAACGAAGCC GGGACGAACG AAAGCATCGC GGCGGGCAAT
ACGATTGGGG AATTGGGTTT GGTGGAACAC ACGCCACGGA TGAGTTCCGT CACGGTAGTG
TCGGCGGACG CTGTCCTCTA CAGTCTACAC CGCGAGCGGT GGCGGGAATT GAAGGCCGTG
TCCCCCCACG CCGCGTCACT GACGGATCGT ATCTTGATTC GTTACCTGTC TGCACGTGTC
CAACACGTGA GCAATCGTAT CTACGAAACA CGGTGTTTGC CGATATAGAC GTTGGGTTGG
GGGCACCAGG CCATCGTTTG TGGGAATGGC AAAACAAGTC GACCAATCAC GTGGGTGGCC
GGGGTTTGCT GGTATCCATC CTTCCATGCC CGTAAGGATA CCATGTCACC CT
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| Protein sequence | MEVENGDGTN GSRSEEIGAK AAPHATTSTD NRTASFTSTS SPPSFAPFQS QRSVQHKSSY
DVSKSMERLR SSMIGNVSWI PGRHEKEDYD ELGQVPTTRT STTTTASPAT PLPPSLHRAL
GQIPAIVLIG IFHLMIGIPF GASYFPIGWK APGSADDEDE NDDDGVHGIF PLPGKEALGI
RMFLFSTILG QIVFTGLSGF RNPVGLQMVE NVPFCHELAT IAVRHQGYTR EALSTLFAMY
GFSSLLVGAV FYALGRWKLG NVVYYFPKHV LVGCIGGIGL YIAKTGVEVT RNAEFSLRAA
TVTYGLLLVV VLAFEVVLRL LEFGTRDVSG NARYPLLSPL YFCSITPVFY MALFVLGVNI
ETATEEGFFF PALDKCTIGG GENGEACSTS LWDSIFDQNL FNIWKVVNFS TVSFPALMDA
IPTLVALTLF SLIHVPINIP AFANSTDTDV DMNKELIAHG YSNLLVGIFG GLQNYMAYTQ
SVLYDKSGGT GKASGYAVAG ITSVLFLIGP TIASYIPRCM AGTLLVHVGV DLFLEGVYET
WGKFDALEYG GIWLITMVMT LYGMEAAMIA GFITALFTYA VQNTTYVHIL RGSMSAATLR
SSKWNRSTRA NAILADESTG RNRILVVQLQ GHLFFGNMVQ LTQSVNDVLS EKAKPRTEPW
IVIIDFGLVL GIDSSAAQSI SKLSKTLQHK HGVDLCIFVT GSGEGFPTAY SLSKELSTLS
STTPVVVSDE DVRTTEATPL LAPFATPNPD TSSSLYTGSR VCTTLDDALV FAEDALLART
DWSLLEADRH IGDPLRGGVY DITDETRVAL RYLENLCPRG VDQAHVRLLW KCMTRETYVC
GDSVWLQGSE SDCMKLLLRG TLLASLENEA GTNESIAAGN TIGELGLVEH TPRMSSVTVV
SADAVLYSLH RERWRELKAV SPHAASLTDR ILIRYLSARV QHVSNRIYET RCLPI
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