Gene PHATRDRAFT_50056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50056 
Symbol 
ID7198804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp266746 
End bp267650 
Gene Length905 bp 
Protein Length233 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184933 
Protein GI219129516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.466232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCGTACAGC TCTTTCCGAG ACGCACGGGT GTGGTGGTTG TGTGCTTAAC GAATCGAGGC 
AGTGAAACTT GAATGAGCAG AAGAGAAATT GAGCAACGCA AAGAATCGAC TATTGCTAAA
AGATATGAGC GCATTGCACG CGAGTAATCG AGTGTTTCAC CTGCTGGGAC CGTGTTGGTC
GAGGACTTTT CGATGTGTCT GGATGTTCGA AGAGCTAGGG ATACCGTACA CGCTAGTACA
AGAAGCTCTT CCAGTCAGCA AACTCGCACG CAAGTACAGT CCGACCGGGA AAGTTCCCAT
ATTGCTCGAG TTCACGTCGC CAGCCGATGA CACACAACCC GACTTGACGT TGTCGGAGTC
CGTCGCTATC AATACCTATC TTGGCGACTG CTACCCCGAA AGTAACCTAG TTCCGCGACC
CGGCACACGA GATCGAGCCT TGTACGATCA GTACGTATGT TGCATACTAT CCGAGCTCGA
CTCTCAGGGT CTGTGGATCC ATCGCAAGCA CCAGGCCATG GGCCAGTATT TTGGATATAT
TCCCGATGCC GTCTCGCACG CTCAGCATCA ATTTCAACGG TTTAATCAGC AAATGGTTTC
TGTCTTGAAG AACGGGGGAC CCTTTCTTCT TGGAAATCAA TTTACCGCCG CCGACGTGTT
GTACGTTCAT TGTCTGGACT GGAGCAAGTC AATCGGCTGG CTTTCAGATT TGGACAATGG
CGCAGCAGAG ACGGTCGAGT TGTATCGCAA TGTATGCCAC GCTCGAAAAG CGTTTCAGCA
GGCAAGTAAC ATTCGAAAAG AATCGAAGGC CTCCCACAAA TTGTAACATT GACATCGACC
GTTGGTCGCG AGTGCTCCGT CCTTTCCTCG GAATCACACT CCGTTTGTGA CCTGCCGTAC
AGCGC
 
Protein sequence
MSALHASNRV FHLLGPCWSR TFRCVWMFEE LGIPYTLVQE ALPVSKLARK YSPTGKVPIL 
LEFTSPADDT QPDLTLSESV AINTYLGDCY PESNLVPRPG TRDRALYDQY VCCILSELDS
QGLWIHRKHQ AMGQYFGYIP DAVSHAQHQF QRFNQQMVSV LKNGGPFLLG NQFTAADVLY
VHCLDWSKSI GWLSDLDNGA AETVELYRNV CHARKAFQQA SNIRKESKAS HKL