| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50050 |
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| Symbol | |
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| ID | 7198743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011694 |
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| Strand | + |
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| Start bp | 250746 |
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| End bp | 252290 |
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| Gene Length | 1545 bp |
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| Protein Length | 482 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | homeobox protein |
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| Protein accession | XP_002184846 |
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| Protein GI | 219129334 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTCTC CAAACGGCAA TAATTGCTCA ATCAATCCGG CGACCCCGGT ACGATCGACT
TCCAGCACGG CCCCTCCTAG CAAACGCCGC TCCGTCCGCC GTCCCAACGA CGATCTCGAG
CTCATGCTTC AGCACGAAAA CTTTCCTCAT CTCTTGAATT TGGCACACAA AATCAAGACC
GCGCATGTTC GAATTCAAAG CGTGACCACC GGCTTTGAGC CTTCCCAAGC GCTAGCCAAA
TATAGTTTGG CCCCATCGGA AGTCATGGAA GCCGTTACAC GACTACAGAA TCAATTCGTC
TCCAGCGAAA CCTCGCGTGA GACGATTCGG CCTGGAGTTT ATCCCATGAC TGATATTCTC
GTCATGGATT CCATAGAAAC CTTGCAGCGT GAGTGGGAGC ACTGCCAGAA ATGGCTGGAA
GCGTCGGAAA GTACTCGCCT TGACAAGGAT CCCACTGCCG AGCCTGCTGT ATCTGAGCCT
CCGACCCTTC CAAAGAAACG AAAAGCTTCT GGCGCCAACA GCGGTAGCAA AAAGGAAGCT
ATTGCGGTGA AGTACTCCAA ATGGCAGACA GATATTCTCA TGAACTGGAT GATCCAACAC
GTCGATGAAC CCTTTCCGAA ACAAGGCGAG ATTCATCAGT TGATGGACAT GACCGGGCTC
ACGCAATCAC AGGTCATCAA CTGGACAACA AATGTTCGCA AGCGCAACCG CAAGGCCACA
TGCCAAAACG GAAAGAAGCC CCACCACTTT ATCGACTTTG TATTCCTGGC ACACGATCGC
GAACGAAGAG CACGCAAGGC GTCTTCCATT GCGACGGCCC ACCCATTAAT GACTGGTTTG
GACTCTTTTC AGAATGCCCC CAGGGAGAAC ATATTGGCGG TCCCGCCATC ACCGAGTGCA
TGCGCTGTTC CTACCCGGCA AGCGGCCAGT TCGTACTCGT ACCCTTCTCC TCCTTCCTAT
CCACAGCCAA CGTACAATCA TACAAGTCTA AGCTACTTTG CCAACCAAAC GCCAGATTTC
AAGTGCGTGC ACACGGTGCC GTTTTCACCA GGTACAATGG CATCTTCACC TCCGCGTTGC
GCGGAAGACT CGGCAATTCA GGAACATAGC CAGACACTCA TGCAAGAAGA AATGTGGGAG
ATACACGATG ATTTTGATCC TGTACCAATG GAAGAAGAAT CAGACGAATT CATAATGGAA
GAATTTGCCA AATCTTGGTT GTTTGAAAAC CCGATGGACG TGAACGATCC GGACTCCTTG
ACAGTGCAGC AAGCTCCCTG CAGCACAATG CCTCGTCTGA ACGACCTGGG TTTGCTGCCC
AGTGTTACTG AGGACAGTCA CGAAAAATTA CACCGTAACC GAACAGCTAG TTTTGATCTC
GGAGAACTGG AGGACGAAGA CATTGACGCC TGGGCCGCCG ACATGGGACT GACGATTGAA
ATTCAGTAGC CGCGCGGGTC TATCATGTGA GGGTCACATG ATGGAACTAG GTTGTACATT
CGAAACGCGA CATAAATCTT TAGCTTAAAC AACGTAAATG AAACC
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| Protein sequence | MQSPNGNNCS INPATPVRST SSTAPPSKRR SVRRPNDDLE LMLQHENFPH LLNLAHKIKT
AHVRIQSVTT GFEPSQALAK YSLAPSEVME AVTRLQNQFV SSETSRETIR PGVYPMTDIL
VMDSIETLQR EWEHCQKWLE ASESTRLDKD PTAEPAVSEP PTLPKKRKAS GANSGSKKEA
IAVKYSKWQT DILMNWMIQH VDEPFPKQGE IHQLMDMTGL TQSQVINWTT NVRKRNRKAT
CQNGKKPHHF IDFVFLAHDR ERRARKASSI ATAHPLMTGL DSFQNAPREN ILAVPPSPSA
CAVPTRQAAS SYSYPSPPSY PQPTYNHTSL SYFANQTPDF KCVHTVPFSP GTMASSPPRC
AEDSAIQEHS QTLMQEEMWE IHDDFDPVPM EEESDEFIME EFAKSWLFEN PMDVNDPDSL
TVQQAPCSTM PRLNDLGLLP SVTEDSHEKL HRNRTASFDL GELEDEDIDA WAADMGLTIE
IQ
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