| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50045 |
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| Symbol | |
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| ID | 7198740 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011694 |
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| Strand | + |
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| Start bp | 238023 |
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| End bp | 240772 |
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| Gene Length | 2750 bp |
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| Protein Length | 696 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184843 |
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| Protein GI | 219129328 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.361429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TACTCTACTC GAATCGAGAG TAACAATAAA GCTTCCAATC CAATACTGCG GAAGGTTAAC
AACTCGCAGT GTTTTTCTTT CTCTTTCAGC AATACACGGC TAATTCATTG CAGTAGACTG
CGTTCCAGAG TATGAACGAA GACAGTACCG AAGACCCGGA TGATGGCAGT GTGGCGCTCT
GTGCATCATG CGATCGTTGC CGCTCGCGAA AGACCAAGTG TGACGGCCAG CGCCCCTGTG
GAAACTGCTT GGCCAAGTAC ATGAAGAAGA ATAAACTCAG TAGGTAAGTG GCAGCGAGGT
TGCTAACGAC GGTGACCGTA GAAACATCTG TGGTGGTATC TGACGAGACC GAAGTGGTTT
TGACCAAAAA GTGAAAAGGC GAAAAGCGCC GAAACAACGG GGAGGTTTTA TAGATATTTG
AATCTCGTGA AACTATCAAG GGGAAAAATC GATGGTCGTA CGATATACGG TTGTAGTGCC
GGGCTTGGGG TGGTACGATT GTGTAATACT CATAGTCCGT CGAATACATC GGAACATCAA
TCGGGTTGGG CTCCTTTCAT TGATTGGCAG TGCGACGGAT TCTAGCTCTA CCCATGCATC
GCTTTGCCAT CTTACACCTA TCCTTCTTTT GTACATCAAA CAGCGCGGAT GGAATCGATT
TTACCGAGTG TGAGTGTGTC TATTCACCCG CTAAGCGTCG TGGCCCTATT CCGGGTCGTA
CCGCTGGCCA AGCTCGGAAG GCCACCGAGC TGCAACATCA CCAACAGCAG CAGCCGAATG
ATTGGCCTCA AAATTATCAC AACAACCCTT CGACTGGGGT GAACTTGAAC GGGACAGGAT
TGGACGCCCA AATGACTGCT GCTTTATTTT CCGGCCAAAC CGAACAGGCG TCGTTGCAGC
AAAAACTGAA CTTTTTGCAG TCACTGCAAA ATCAAGACGA AGATCATCTC ATGATGCAAC
AGCAGCAGCA GCAGCATCAG ATGGACGAGC CTGCCAATCG ACGAGTGAAA CGTGAAGATG
CTGGACAGAA TACCAGCACG AACGGGATTC CTCGCACTAT CACCACCCAC ACGCACCTTT
TGGAACGCTC CAATCCAGAT GGAGCCCGTC TTCGTGCGTA CTACCAGCTA TCGATCGACG
AACTCTATCG TTTGCCTCCG ATACCGACGG ACGAAGAATA CTGTGCCCGC CTTAACGTTC
CGGGGATGAC GCCTCAAATG ATCCCAGGTC CACATCTGGC CGCCCTGAGT GCCGCACGCT
TTGCTGAGAT CGCGCTCGGC GCACTTGTTC ACAACGAAGT GTCGTTAGCG ATGGAATTGT
GTAATGCAGT TGTTCACTGC TTGCGGGAAT CCGTACAGGA ACCCGTGCAG ACACCAGTGA
TGTTCGAAGT TGCCAAGGCG TACTTTTTGC TCGGCGTTTT CCGTGCCTGT CGCGGAGACA
TGGAACGGTA TTTCAAATAT CGCCGGGTCT GTATGACGTA TTTGGCGAAG CTGGAGGTAA
GTGACAGTAC ATTTCACTTC CAAAGATATT ATATAATGTG CTCACGGGGT ATATGTATGA
TTTACTCCCT GCACAAAGAA CGATGATAAA ACGGCGGTGC TCCTTGCCGC AGTGGCCTAC
TTGGACTCTT GGGCGTACAT GACTTATAAC GCCGACGACA AATTGGTGCC GGCCGTTGAT
GATCAGCTTC CACGCGTGAT CGTCTATTAG TCGCAGTCCG TACGCTACTC AGACTGAGCT
CAAGTATGAT GTCAAGTTGG ATGCTGGTGC CATTGCTAGC GATCCCAAGA ATCAAAACTG
GATTCAAGGT GCTCCGCCGG TGTACCTGAA TAATGAGGCC CCGTTGCATG CACGGGCTTT
GGATGCTTTG GCTTGTGCCG TTCGCACTTG TTGCGATCAA GCCAACAGCC GTTTCGCTCT
TATTAGCAAG GAGGCTAATA TCGAAGGTCT GGACACGATT CCTTCCGAAT CCATTTCTTC
TGCAACGTAC AATGCAGTTC TATCGCACGA GAATGAGCTC TGCAGTCGCA ATATTGTTCT
TTCAGCGTAC ACTCTGATGC AACAGCACGA ATCTACTGAC AGTTCTCGAC ACAAAAACGA
GGGACAGCAC ATGGTCATTT CTGCGATGGA CGCGTTTCTG GAAAATAGTG ACGAAGATGG
CAATGGTGGA TTCACCGACA GTCAGATTCA GAGTTTGCTT TCTGTTTGTA ACACTGCGAT
TGAGAATCCG TTCCTCTTGC ACCATGCTGG TCCAACATAT CACATGGTGT CCAACGCGGC
CGTACTATTG TGTCATTTAT TAAACGGCCT TCATATGGCC AAGATGAACG GTCAAGATTT
CGGTCGGATG GAACAGTCCA TGTTTGAAGA AGTCTTTGAC GCTTTTATAT CGATTCGCAA
ACTCTTGACG ATTCATCGAC GTAAACTACC GGTCAAACTG CGTTGCCATG CTATTCCGAG
ACCAAGCATG GACGGTTTAA AGGAAGGGCA GCCGTTAATT GATTTGGGGG AAACAATTCT
TTGTGCGTGC CGTGGATGCC AGGGTTTTGT CCTTATGGCT TGCAGTCCCT GTGTAGCGGC
GGAGCGTGCC CAGGCGGCGC AACATGATTT GTCAGTCGAA GCGGCGAAGG AAGCCGAAGC
GATTGAAATG GGCGAGCTCG ACAACGAATT GGACAACTTG GGAGCGGAAT TTGATATGGA
CGACGATATG TTGTTGGGAA TGATTAGCAA TCTCATTTCA AGTTGAAAGG
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| Protein sequence | MNEDSTEDPD DGSVALCASC DRCRSRKTKC DGQRPCGNCL AKYMKKNKLS SADGIDFTEC
ECVYSPAKRR GPIPGRTAGQ ARKATELQHH QQQQPNDWPQ NYHNNPSTGV NLNGTGLDAQ
MTAALFSGQT EQASLQQKLN FLQSLQNQDE DHLMMQQQQQ QHQMDEPANR RVKREDAGQN
TSTNGIPRTI TTHTHLLERS NPDGARLRAY YQLSIDELYR LPPIPTDEEY CARLNVPGMT
PQMIPGPHLA ALSAARFAEI ALGALVHNEV SLAMELCNAV VHCLRESVQE PVQTPVMFEV
AKAYFLLGVF RACRGDMERY FKYRRVCMTY LAKLENDDKT AVLLAAVAYL DSWAPYATQT
ELKYDVKLDA GAIASDPKNQ NWIQGAPPVY LNNEAPLHAR ALDALACAVR TCCDQANSRF
ALISKEANIE GLDTIPSESI SSATYNAVLS HENELCSRNI VLSAYTLMQQ HESTDSSRHK
NEGQHMVISA MDAFLENSDE DGNGGFTDSQ IQSLLSVCNT AIENPFLLHH AGPTYHMVSN
AAVLLCHLLN GLHMAKMNGQ DFGRMEQSMF EEVFDAFISI RKLLTIHRRK LPVKLRCHAI
PRPSMDGLKE GQPLIDLGET ILCACRGCQG FVLMACSPCV AAERAQAAQH DLSVEAAKEA
EAIEMGELDN ELDNLGAEFD MDDDMLLGMI SNLISS
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