Gene PHATRDRAFT_50029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50029 
Symbol 
ID7198726 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp196138 
End bp196645 
Gene Length508 bp 
Protein Length127 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184912 
Protein GI219129472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.683046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCGC GATCACTGCA AATCTTGGCT CGTCGGTCCT CTGTACATTC CCTAGTGACC 
CGATCCTTCC ACGGAACGGC CTTGCAAAAA GGCGGCATGA GTCCACCGCT GCCGCCCTTT
GCCCGCAGCC CCGTCCCGAC GTCATCGGTA CGTGGAACAC GGAATCCTGC AAAATCATAC
GGATGTTTGA ATCGAAGTCT GAAAATGTCG CTCACAAAAT GGTGCACCTC GTTCCCACTG
TCGATACAAT ACACAGCTCA CGGAAAACAC GGACGCTGTC TGGGACGATG GGGTGGCTCC
TGAACTGGCT CTAGATTTTG ACGCTCCCCA CATTAGTACA AAGGAGGCGA TTTGGACCTT
GCTGGGAACC CTGTCGGTTT TTGTGGTGTT CTATCAAGGC CTGAAATTGA CAATCCATGA
TGAAAATCCG GCATTACCTC ACCACACCGA CTTGGTGATA CCAGACTATA GCGAGGTTCA
CCAAAAGAAG TAAAACAGGC CTGATTCT
 
Protein sequence
MASRSLQILA RRSSVHSLVT RSFHGTALQK GGMSPPLPPF ARSPVPTSSL TENTDAVWDD 
GVAPELALDF DAPHISTKEA IWTLLGTLSV FVVFYQGLKL TIHDENPALP HHTDLVIPDY
SEVHQKK