| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50026 |
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| Symbol | |
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| ID | 7198724 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011694 |
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| Strand | + |
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| Start bp | 180760 |
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| End bp | 184287 |
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| Gene Length | 3528 bp |
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| Protein Length | 741 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184837 |
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| Protein GI | 219129315 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.301248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGTCACACTC GAATGGTTGA ATGGTGACTG ACAGTGACTG CTTGTCTTTA CTTAGAGAAT
GGACAGATCT CCTCCCCGTT GCTTCAACTA ATTGTGTGTC CAGAGTACGA ACACCGATGG
TGGGATAGGT TCCTTTGCTA GAATACTCTT GCGTAGAAAA AGTACCATCT GTTAGGGAGG
ATGGATCTCA TTGACACAGT GAACGTCGCA TTTCAGGACC CATACGCCAC TCCATACCAG
TTCGTTCGGG GGAAAGAAAA TCCACAAGTA GCCGTAAGTA CAGCAGTTCG TTGGCTCGAG
TGAACGACAC TTACCGACGG TGTCATAAAA AGCAATCGAC ACCACTATCA ACAACACACA
CACACACACA CACACAAACA CCACACATTC CTCAAGGTCC GTTGGTTGCG TTGCGCTGTT
TCGGTTCACT GCCTCTACTT ACCTACTCAC CTGCGTACAC ACGTGCTCAC TTCCTTTTCC
TTCCAGCGTT CCCCCATGGT TGCTTCGTTT TCAATGGGCC GAAACTCGGC GACGTGGTCG
GTGTCACCGT GCACCCGCAT TCTTCTACTG ACGCTCGCAA CGTGGAACAC GTTACCATCA
CTCGTCCAAG CCGAGTGCTT GGCCAATACG GAGTTCAACG ACTTTTTCGA AGGCCTCGTG
GGAGCACCCA TTCCCAGTGA AGGCTCGTGC TGCATGTTTG ACGTGTGCGG ACTCGAATGT
CCCGTCGATG TGCCCGAACC CAGTAACGGT ACGTTCCAAA GGTGCTGCCG TCCAGCTCTC
GGGCGATGGA TGGATCTAGT ATTTCGTCCC TTGTTCCGGG GTCGATCGAC ACACACACAC
ACACACACAC ACACCTTTCT TTCTACCCAA CGATACGATA CGGTCAAAGT CTGCCCACAG
AAAAAACAGA CACGTGCCTT GGCTCGTGGA CAGGATTGGC AGTCGCCCCT TGTATTTACT
AGGAATGCAA CGAATCCTAT CCATTCTCAC CTGTGCCTGT TGTGTTCTTT GACAGGCTTT
GGAATTGCCG TGGCCATTAG CATCGTCATC TCCTTCTTGA TCGGCATCGC CACCTTCTTT
GTTGTCAAGG GACAGTCCGT CAACTTCTTC GTCGCCGGTC GGTCGCTCCC GTTATGGATC
GTATCCATGA CGCTCGCGGC CCAATCGATC GACTCCAACG CCATCCTCGG GAACGCCGAT
TTGTCCTACA AGTTTGGCTT TTACGACGGC GCCGTCATTC CCATTGGACT CGGACTCAGC
CTCATCCTCA ACGGTATATT CCTCGCCCAC CACGTCAACA ACGATGAAGT CCTGACGCTG
CCCGATATCT TCGCCAAGCG CTACGGCAAG GTCGTCGAAA TCCTCGTCTC CTTGACCACC
ATTTGCAGCT TTCTCATGCT CCTCGCCGGG AATCTCGTCG GATTCGGGGC CATTACCAGC
TACGTTTGGG GTATTTCCGA TACCGCCGCC ATCTGGATAG CTGCCGGTAT CGTCTGGGTC
TACACCGCCA GTGGCGGACT CTTCTCCGTC GCCTATACCG ACGTAGTTCA GGGACTCATG
GGATGGTCCG GATGCATCGT CATGGCCTTT TGGTTCATCG CCAACGAAGA ACCCAACGCT
CCTCCACCTT CGATTGGATA CCCACGTACG TAACAAGCGT CCCCACGCGT GCGGTAGACA
CCACATGGCT CAATCCGCGT CTTGCGCCGT TGATTTTTGC CACTCACCGT AGTATTCTTT
TTTGTTTCAA TGGCGTGTAG TCTACGTCTA CCCGGATAAT ATTGGGGACG GCGGTGTCTG
CGACATGTAC GACGGAGTCC CCTGTGCCGT CACGGCCGAC GCGTGCTGCT ACAATATTGA
ACGCTGGTGC CCGGAATTCA ACGTCACGGG ACAGTGCGAA CGCTTCGACC GCGGAGCCTA
CCCCGTCGGT GATCAGCGCA TTTTTTCCGA CCAAATGTCC AATTTTCGTG CGCTGACACC
CTTTCCCAAC GCCATTTTCT GGAACTGGGC CACCATTTTT ATTCTCGGAT TCGGCAACCT
CGCCGCCCTC GATTTTCAAG CCCGGTGTAT GGCTAGCAAG ACGCCCCGAA CGGCACGTAT
CGGCTGCATT ATTGGCGGGT TGTTTACCTT TTTGATCGGT ATTCCCTTTG CCTACATGGG
CGCCATTTCA CGGTACGTGG CTAGAGTCGT GTTGTGTCCT AGTGGCACCC GTACCTTGGT
CCTGGCTGCT GGTCGACGTC GTACGGTTCC CCATCACGTG TGTCTGACCC CGTATTTGTT
TTATTGTTGC GTTCCGTTGC GTACAGAGTG TACTACGGTC CGGATTCCAT CCACGCCGAA
TTCGAGGTGG ACACGTGTCT CAGTCAGTTG GCCCTGCCCA CCTGTGGCCT CTGGCTCCCC
GACAAGAACG CCTTTATCAA GTTGTTGACG CACCAAGCTC CCGACTTTTT GGGTGGTTGG
TGTTTGGTCG GGATCGTTGC CGCCAGTATG AGTACAGCCG ACGGAGCTAT TCTAGCCATG
GGTACGGTCT TTGCCCATAA CATCATGCGT CAATTTGATG AATGGATTCC CAATTTGGTG
ACGCCGGACA ATTTGTTGGT CACCGCACGC GTCGCCACTT TGCCCTTTAC TCTAATCAGT
ACCTTTATTG CGGCCTTTTA CCGATCCTCC CATTCGGCCG GGGCGACCGG GTACTTGTTG
ATTGTTGCTT TTGATATTGT CTTGGCCACC GTCGTGGTCC CTTTGTTTGG ATGCTTCTAC
TGTAAAAACC CTTCTCCCCG TGCCGCTTTT GTGGCCATTA TCGGCGGTGC CATTACGCGT
GTCGTGCTGG AATTCGCTCT GCCCAAGGAC GGTTTCTTGC TTTTGCCGTA CGATGCGCCC
GAATTTCTCA ACACTGGCCC CGGCGCCAGT ACCGGTACGC CGGTCTTTTG GGACGTGGAT
CCGGGCGACA TGTGGGACGA AACCGTCGAA CCCTGCGTCC AGGAATCCTT TGAAGACTTC
ACCGGCGTGG ATTCCTTGTC CGCCTTTTTG GTTTGCATTC TTTCGTTCGT GTCCGTGCAA
ACGATCGAGC ACTGTACGGG CAAGCCTTTG TTCAGTTTTG CCGGTATGCA GGGTTACCAC
AAGGATACTA CGGAACATCC ACTCAAGGGT AGCAGTATTG ACAAAATGGA CGAAACGGCC
TTTCAGGACG ATACCACGAA ACGCGGAAAT CCCGACGCCG ATGAAGGCGA TGCCTAAGGT
CGACACGAAC TCGGTGTAAG ATGTCTCTTC TTTTGAAGTT CGAGAGTGGA ATGTTGTAAT
ATCTACTTGA TCAGCAGTTT GGATGCCGGT GGGCTCATTG CTGGTTTTGT TGGCATATTC
TATACCGTAC ATGGTTTTCG GGTCGAGAAA TTCAACGTGT GTTTCGATTT AATATGTTTT
GTTGCTATGG GAACCGCTTC CTTGACTTCG GCAAGCAATT TGCGTTTTTG AATAATAGCT
TGTCCGTCGG TTTTAATTTG GTAGTATAGC GTGATTTTTA TGTTTTGC
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| Protein sequence | MVASFSMGRN SATWSVSPCT RILLLTLATW NTLPSLVQAE CLANTEFNDF FEGLVGAPIP
SEGSCCMFDV CGLECPVDVP EPSNGFGIAV AISIVISFLI GIATFFVVKG QSVNFFVAGR
SLPLWIVSMT LAAQSIDSNA ILGNADLSYK FGFYDGAVIP IGLGLSLILN GIFLAHHVNN
DEVLTLPDIF AKRYGKVVEI LVSLTTICSF LMLLAGNLVG FGAITSYVWG ISDTAAIWIA
AGIVWVYTAS GGLFSVAYTD VVQGLMGWSG CIVMAFWFIA NEEPNAPPPS IGYPLYVYPD
NIGDGGVCDM YDGVPCAVTA DACCYNIERW CPEFNVTGQC ERFDRGAYPV GDQRIFSDQM
SNFRALTPFP NAIFWNWATI FILGFGNLAA LDFQARCMAS KTPRTARIGC IIGGLFTFLI
GIPFAYMGAI SRVYYGPDSI HAEFEVDTCL SQLALPTCGL WLPDKNAFIK LLTHQAPDFL
GGWCLVGIVA ASMSTADGAI LAMGTVFAHN IMRQFDEWIP NLVTPDNLLV TARVATLPFT
LISTFIAAFY RSSHSAGATG YLLIVAFDIV LATVVVPLFG CFYCKNPSPR AAFVAIIGGA
ITRVVLEFAL PKDGFLLLPY DAPEFLNTGP GASTGTPVFW DVDPGDMWDE TVEPCVQESF
EDFTGVDSLS AFLVCILSFV SVQTIEHCTG KPLFSFAGMQ GYHKDTTEHP LKGSSIDKMD
ETAFQDDTTK RGNPDADEGD A
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