Gene PHATRDRAFT_50007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50007 
Symbol 
ID7198707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp119155 
End bp119949 
Gene Length795 bp 
Protein Length161 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184893 
Protein GI219129432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACTGCTCC GATAAACCAA CCGCTTCGGC CCCTCGGTTA CTTTCGTCAC ATAAACTGTT 
TCGTGAGTTC CAAACACACA CCGAGTAAGC AAAGTGCAAA GATGAGTCGA AGTGCGGAAA
AGAACATGAG ACCGACTCGG TTGGTGCAGC TACTACTCTG GGGAACCGTC CTCGGGTACA
CAGTAATGTC GGTGGAAGGA GCGGAGCGGG TTCGCTATCG CCGTGACTTG GTGCAGATTG
TGGAAAGCGA GGGTGAGCGA GATACCAAGC AGCTCCACGC CAACACTAAG AAGCACCGAG
GAGACCAGCT CTTGACTCAG CTGTGGCATG TAGAAGCCCA CCCGCAACAA GCGGATGCTG
TGTCCAAAGA TGCCGCCGCT GGAGCTCCGC GTGCCAGCGC TCAGCACCGA GCTCTCATGA
CGATGAAGTC CGCCAGGAAC CCCAAATCGG TCAAGGCTCC CACCCCCAGT AGTCCAACAG
CCCCCAGTAT GGAAGCACCG GAAATTGATG AGGATATGTT GACCATGATG AGCATGAGTC
TCAGTATGAG TATGAGCATG TCGATGAGCT TTGCTTATTT TATGTAAATG TCACGTCTGT
GTGGTCTCCT TGCCCCGGTT TGGTGCCGGA GATCACTCTG TTGAGCCGTG TCGAAACGCA
AAAGTGCCCT TACTAGCAGT GTTGCGGCGC ACGCGAGTTG GTACGGATGT ACCGCTTCGT
GCTGAGCTGT TTGATGACAG TTGTTTGTCA CTGTCAAACT AATTCTCTAG TAAAAAGTAA
TTTATTTCTG ACGTT
 
Protein sequence
MSRSAEKNMR PTRLVQLLLW GTVLGYTVMS VEGAERVRYR RDLVQIVESE GERDTKQLHA 
NTKKHRGDQL LTQLWHVEAH PQQADAVSKD AAAGAPRASA QHRALMTMKS ARNPKSVKAP
TPSSPTAPSM EAPEIDEDML TMMSMSLSMS MSMSMSFAYF M