Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50007 |
Symbol | |
ID | 7198707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | - |
Start bp | 119155 |
End bp | 119949 |
Gene Length | 795 bp |
Protein Length | 161 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184893 |
Protein GI | 219129432 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAACTGCTCC GATAAACCAA CCGCTTCGGC CCCTCGGTTA CTTTCGTCAC ATAAACTGTT TCGTGAGTTC CAAACACACA CCGAGTAAGC AAAGTGCAAA GATGAGTCGA AGTGCGGAAA AGAACATGAG ACCGACTCGG TTGGTGCAGC TACTACTCTG GGGAACCGTC CTCGGGTACA CAGTAATGTC GGTGGAAGGA GCGGAGCGGG TTCGCTATCG CCGTGACTTG GTGCAGATTG TGGAAAGCGA GGGTGAGCGA GATACCAAGC AGCTCCACGC CAACACTAAG AAGCACCGAG GAGACCAGCT CTTGACTCAG CTGTGGCATG TAGAAGCCCA CCCGCAACAA GCGGATGCTG TGTCCAAAGA TGCCGCCGCT GGAGCTCCGC GTGCCAGCGC TCAGCACCGA GCTCTCATGA CGATGAAGTC CGCCAGGAAC CCCAAATCGG TCAAGGCTCC CACCCCCAGT AGTCCAACAG CCCCCAGTAT GGAAGCACCG GAAATTGATG AGGATATGTT GACCATGATG AGCATGAGTC TCAGTATGAG TATGAGCATG TCGATGAGCT TTGCTTATTT TATGTAAATG TCACGTCTGT GTGGTCTCCT TGCCCCGGTT TGGTGCCGGA GATCACTCTG TTGAGCCGTG TCGAAACGCA AAAGTGCCCT TACTAGCAGT GTTGCGGCGC ACGCGAGTTG GTACGGATGT ACCGCTTCGT GCTGAGCTGT TTGATGACAG TTGTTTGTCA CTGTCAAACT AATTCTCTAG TAAAAAGTAA TTTATTTCTG ACGTT
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Protein sequence | MSRSAEKNMR PTRLVQLLLW GTVLGYTVMS VEGAERVRYR RDLVQIVESE GERDTKQLHA NTKKHRGDQL LTQLWHVEAH PQQADAVSKD AAAGAPRASA QHRALMTMKS ARNPKSVKAP TPSSPTAPSM EAPEIDEDML TMMSMSLSMS MSMSMSFAYF M
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