| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50006 |
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| Symbol | |
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| ID | 7198783 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011694 |
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| Strand | - |
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| Start bp | 115434 |
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| End bp | 118075 |
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| Gene Length | 2642 bp |
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| Protein Length | 735 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184892 |
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| Protein GI | 219129430 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.415443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCGGTAGACT TTTGCGATTC GTCGTCTGTT GCGCTCCGAG AGACAGGGCA CATACCTTCA
CTGCGTCATT TCCACAATCT CGACCAGAGA GACGAGCTTC GAGACGTTGC TACTACTGTT
GTTGTTACTG TGAGGTCATA TGGAGCACTC GGCCAACGGG ACGAAGAACG CGTCGGCATT
CTCGACGGAA CAGACGAGAT TGTTGCCGGC ACGGGCAGTC GAGAGTCCGT CCGACAACGA
CGACGAGTCG GGCTACGGTG CGGATCCCTA CGATGCGCTG GAACGACAGG TACGCCTTAC
TGCTGTATCG ACGCCCTTCC TTCGGTCCCC AAGACGCCTG CTCGCACTCA TCGGTACAAC
CATACTGGCG ATAGTAGTTG TGATCTACAC CGGTAGCACT ACTAGTCGTC CCCACGAAAG
TAGTACTAGT AGTAGTACTC GCTCAAGCAG CCCTGTGGAG GCTGAGCATT CTCCGAAAGA
AACCATGTTC TCGACTTTGT TGACATTTGC CACTCCCTGG AACGATTTGG ATTGGAAGGA
CCTTCACAAT CACGACGTGT TGCTCCAAGT CTGGGACGAA TGGAAACGCT CTTTGCGTGA
CGACAATCGC AAAAATCACG ACGACCGCAA CAACAACGAT GACGACCACA ACGCGATGGA
CTGGTGGCAC ACCATTCGGG TGCGCGCGGA GCCGCTGCTG GGGCACGCCA AGGACAGTGT
CGGGAATACC TGGCACGAGG CGGAATCGGC CGTCCAAGGA ACAACCAGTG AATGGCACGT
GGGAGAAAAA CTACGTAGCG CGCAAGAGGC CACGTCCTCT TGGGCGCAGC AGACGGGACA
GCAGGCCCAA AATGACGTGC GGGATTGGCA GTTAGGACTG CACCTCCAGC AAGCGGAACA
CGCCGCCGCG CAGCTTTGGA ACAGTACCCT CCAAAAGGCT ACCGAAGTAT CTTCGAGCAT
GAGCGCTAGC GGTGGTGCCG TGGGTAAGGA GTGGTTAGGA GACACGCAAG ATTGGCTACA
CGCGGCTTGG AATGGTACCG AACAAACGGC CGAACACGCT TGGGGTACTG TGGAGGACGA
AGCGCAACGC GTCGGTCCCC AGGCACGGAC ACTCTGGAAC CACACGGCAC AGACCGAAGG
TGAGTGGTAC AATCACGTAA AGAACAATTT GCGACACTTT GGGTCCAAGA TTCGTGGCTG
GTGGGGAGTC ACGGAGCGAG CGGCCGTCAA CGAAACCGGA GCGATGGAAG ACACCTTTCA
GAATTGGTGG AAGCAGGCCA ATGGAAAGGA GCGGGCCTGG TGGAACGATA CCGTGCACGC
CTATCACGTG CTGGCACAAA AATCAGAACG TGCCGAAGCT TCGTGGTGGA ACGCGACCCG
CGAAACGGTG GGGCATGGCT GGAACGCCAC GACCGCCACC ACGGATGAAG CGTGGGAATC
GACGCAGCGA TGGTTTCGGG CACGGGCGCA CGTAACCCAA AATCTCGAAG AACCCTTGTT
GTATTTGAAC TCATCACGGG CCTACTCCTT GCTACGCAAC GCCCAATACG GCTGGTACGA
AGCCAGTTCC GATTTCTTTG AGTATCAAAC CGGGTGGGAT GTTCAGATCA ATCAAGCTTA
TTGCGGGGTG GCTGCTGCTG TGGCCGTTTG GAACAGTATC CGATCCAGTG TGGTTGGTGC
GAACGATGCA GGGGCGGTGG AGGCCGCCAT GGACCCGTCT TACGAACCCT ACGTGTACGC
AACCCAATCC AGCTTGATCC ACAATAAATG CGTCCACCAC AAAGTGATTC GACACAACGC
CACCTTTGAC GGTATTCTGC ACGTTCCCGG GGGTCTCAGC CTTGTCCAAA CAGCGGATTT
GCTCACTTGC ACGCTGCCGT CATCTTTGTG GACGGTGACA ACACACTACG TAGTGGCAAA
CACCACAACT CTGGACGATG TACGGGCCGA CTTGCAGCAA GCCTTACTCG ATCCCAAGGC
CCGGGTGTAC GTCAACTACG ATCGTTCTGT CCTCGATCAA CACGGTGGCG GGCACTTTTC
TCCTTTAGGA TCCTACGCTT CCCGGGATGA CGCATTTCTG TTACTCGACG TGGCCAAATA
CAAGTATCCG GTACGTTCGA AATCCCAGCC GGAGAGGCAA GAAAGCTTCT CTGTACTCAA
CCACCATTCT TCTTTTTGTG GGTCGGCTTA AACAGTCTGC TTGGATTCCG GCGGCCCGAT
TGTTTGCTGC CATGAGTGGG ATTGACGTCT GCGGGACTTG GGATTATCCA CACGCTCAGG
ATTCTCTGCC CGTAAGCTTG TTAAAAGCCA ATTCAACGAA GGCCTACGCC CGGGCCTTGA
CAAAATTAGG CTGCAAACCG TTGCCGCGGG GATATGTGAT TGTACGGTCC ATTACAGAAG
ATACTGGAAA CAGATCGATC GTAGGGACAT AGGCTCTCGT GTGATGGAGT GGTTATCTTC
CGATCAAAAT ATCAGTAGCG CCGAACCGCG GTGTGTCTCT GTGTCACATC AAAAACCTGT
GGGAGTTGCG AACTTTTCGT CAGCCATACA GTCCTGAATT GTGAACTATT TGTAGCAAAG
AGGAAAAGTA AGGTGGACCT TGTCGGATTC AGGTCGAACT AAATGTAAAC ATCGAAATCA
TC
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| Protein sequence | MEHSANGTKN ASAFSTEQTR LLPARAVESP SDNDDESGYG ADPYDALERQ VRLTAVSTPF
LRSPRRLLAL IGTTILAIVV VIYTGSTTSR PHESSTSSST RSSSPVEAEH SPKETMFSTL
LTFATPWNDL DWKDLHNHDV LLQVWDEWKR SLRDDNRKNH DDRNNNDDDH NAMDWWHTIR
VRAEPLLGHA KDSVGNTWHE AESAVQGTTS EWHVGEKLRS AQEATSSWAQ QTGQQAQNDV
RDWQLGLHLQ QAEHAAAQLW NSTLQKATEV SSSMSASGGA VGKEWLGDTQ DWLHAAWNGT
EQTAEHAWGT VEDEAQRVGP QARTLWNHTA QTEGEWYNHV KNNLRHFGSK IRGWWGVTER
AAVNETGAME DTFQNWWKQA NGKERAWWND TVHAYHVLAQ KSERAEASWW NATRETVGHG
WNATTATTDE AWESTQRWFR ARAHVTQNLE EPLLYLNSSR AYSLLRNAQY GWYEASSDFF
EYQTGWDVQI NQAYCGVAAA VAVWNSIRSS VVGANDAGAV EAAMDPSYEP YVYATQSSLI
HNKCVHHKVI RHNATFDGIL HVPGGLSLVQ TADLLTCTLP SSLWTVTTHY VVANTTTLDD
VRADLQQALL DPKARVYVNY DRSVLDQHGG GHFSPLGSYA SRDDAFLLLD VAKYKYPSAW
IPAARLFAAM SGIDVCGTWD YPHAQDSLPV SLLKANSTKA YARALTKLGC KPLPRGYVIV
RSITEDTGNR SIVGT
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