Gene PHATRDRAFT_49989 details

Gene Information

• Locus tag: PHATRDRAFT_49989
• ID: 7198774
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: +
• Start bp: 52983
• End bp: 58383
• Gene Length: 5401 bp
• Protein Length: 1498 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002184819
• Protein GI: 219129278

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACAGT CCGAGTCCAC AATAACTTCC CCCCCCAAAG GCACCTCGAG CAATCCACTC 
GAAGACGGCG GAGCGTCCGC GTCCTCCTCC TCCTCCTCCT TCACCACTCG CCAACCCCGG 
ACCGCTACGA ATCTCACGAT GTCGCCCCCC CTTTCTCCTC AACCTCGTCC CAGCGGAGGA 
ACCAATTCCC ATTGGGAAAC TTCCGAAACC GGCGCCTCCC AGGGTTCGGA CGGGGAAGTC 
GTCTGCCACG CCTGCGGCTT TGAAGCCTCT TACGTTCCGG AAGGTATGTT GCACTGTGAA 
CGCTGCCGGA ACGTTTCCTA TTGTTCCCTA CATTGCCAAC AGTGGGATTG GACGTCGGGC 
GGACACTCCG ATCTCTGTGT CGACGCTCGG TCAACGGCTC ACGAAGACAG TACCACCGGG 
AGTGCCAGCA ACAACAACAG TGGCAGTGGA ACTACTCGTC CCTCGGAGGA TTCCACCCTC 
GTCTCCATGG ATATAGCCAA CGTATTCGGA CCCCGAAGTG TCGGATCTGC CTCCACTCCC 
GCACCCGCCC CCGTGAATCG AGGTGTCCAG CGGAGACCGG AAACGAAGGA AGGCGGCCTC 
GGGGCCTACC TCCACGCGCA CACCCCGCGT ACCACCCCAC CAACTCCACT CGCATCCCGG 
TACAATTCTC CCAACGACCA GGACCTCGAC GACGATGATC CGAACGAGGG GTCCATTGTA 
TTAGTATCGG ACTCGGAAAG TACCGACATT CTCGGAATGA TTCAGGAAGA ATCCGAAGGA 
AACGAAGAAC CGGAATTGCA AGGTTCCTGG CGATCACGGG ACAATCCGTT CCACAAATCC 
GCTTTGGGAG AAACCTCGTA CGACTCGGAA CGGGACGAAC GGGAACTCAT TCTCGCCACG 
GCCCCCGCTG CGACGGTCCG GGACGCCCAC GAACACGCTC AAAACAACAA CAATAACACC 
GTCACCGCAA CGGCATCTTT CGCCAGCCCT CAACGAGATT CGCTCAAGGC CTTTCGGGCC 
GTAGCGTCCG AAACCACCAA CGTAGAGAGC CACGGCAAAC ATAGCCTCAA AGGCTTTCGA 
CACGCCTACG ATGATGCCCC GTCGAAAGAA AAGATCGCTT TCTCACACAC ACTCATCCGC 
CACAGTGATA CGGCCGATGA CACCATGAGT ACCACAGGAT CTCATCCTGG CCAAGTGAAT 
GAGGCTACTG CGAACAGGAC AAACCAGAAC GCGACCGCCG TCACGAATTT GGCCCTCAAA 
ACTAGCATCA ACAAAGCTTT GCGAGATTTC GAACGCTTGT ATGGAGAGGA AGCCGCACAG 
CTGGCTGTAT TGCAACTCAC CCAAGGTCTA ATTACTGAAG ACGACGTTAT TGAACAAGCC 
AGTCAAAGTC CGGACGAGTC AGAACAGTAC AATGAAACCA CAACCGAGTC TGGGGACTCA 
TCCCCAGCAG ATCCGAAAAG TTCACCAACG ATTGTAGACC AGAGCCTGTC AAGTTGGGGC 
TTGTCCGGCA TAGCGTCGAC TGAGGGGTTG GACAAGCCAT CCGCGCACAG CACATCGTCC 
CTGATCACAG AAAATATGTC TCGGGACTCC AAAAATGCTG CTACCTTATC GTCATCCTCG 
TCGTCGCAAC AGAATGCGTT GGCCTTTGCA AGTCCTCATT CCGTTGGGGC CACCACCACA 
GCCGCATCTA CGGCTCCGCT TTTGACACCC GCTGAGCCAG AAGACGAAAG TGCTTGCAGT 
GACGGATCCT TGTGCACACC TACTGAATCG TCGGTACAAG CAAAGCCATT TACGGTCCAT 
ACCCCCCGGT ATCTTCAGTA CCGCAATTCC TTGTCCAAAT CTACCGCCAA AAGTGGTTTG 
CCAGGAACGA CAGCTGTAAG AGTTGCACAC GACAGTGATA CAATTAAAAC CCAGGATACA 
AAGAATCGTG CAAACCGACA AAAGGAGCCT ACCCAGAACG GAGCTGCCTT GGTCGGTGAA 
ATAATAGAAG GTGCCGCTGC CGTGGGCACC AAAAGGACAC TTAGCCCCAA TGACCCACCA 
GAGCAGCTAA GGGAAGCGTC ACGAGTCGTG CCGCCTCCTG CGATTGTGGC GACTCCGACG 
GAGACGTCTA ACCAAGATTT TCCACCGTCT ATTCATGAAG AGAAGATCGC ATTATCCATG 
CCCCGTTACC TGACGTATCG CTCGTCGCTG GCCAGATCAG TCGACAGAAA AAGCTTTTCT 
GTCCAGCTTT CTGCGCAAGA ACTTGAATCC TATGAAGTTG GCCAGTTAAG AATGCCGGGC 
AATGGAAAAC ACAATAATTC CGATGTTCCG GCGGTAGTCG CTACGGTTCA GGACAACATA 
CATGAAACGG AAAGGGCCAA GACGGCGACG GTAGCTGCCG AGATGTCGAG CAATTACGAA 
CTGGGGAATA ATGAATTCAG GCAATCTTTG TCTCCATCGC AGGTAGAAGT TGAGGCTAAT 
AAGATGAGCG ATAGTACAGG ACTTGCCGAT GCTATTGGCG GAATTGCAGC CTTGGGGTCG 
GGGGCTGTTG CTCTGGCAAG CACGAAGAAA AATTCTGACA ATAACCAGGT AATATCCAAT 
GTGTTGCTTG CAGATTCAGA GCTGGGTCTG GAATCCCAGA TGGTGCCGAT CATGCGAAAA 
CTGTCACCGA ATGCTATTAA GGAAGGGGCA CCGTCTCGTG CGGAGAGCTT TTACTCTCGC 
TATCGGGCCT CGTTGGCTCA GAGACTTTCC CAACTCTTTA TTGTAGAAGA TGCGATGTTG 
TCTGGCGATG ACTCGGACGA TTCTTTGAAT GCCGACGAAG AGCGAGAACT CACAGACCAG 
CTTTCTTCGT ATTTGGAGAA GGGGAATTCC AAAAGAACCA TTGAAGAGAA TGCATCTCGA 
CCCGGCGCTT TGGGACACAA GAGCTACGAT GGAATGAACA GCTCCTGGAG TGGTTTCGAC 
GAAGAAAATT CTGTGGACGC AAACATCGAC GGCTCTCGCA GCAGCGAAGT CTGCGAGCGA 
AAATTTCAGA CAGCCTTGGT TACTGACGCG GGTGCAATCA ATTTGCGAGA AGCTCGAGAA 
AGCGCTCGAG CTGAACAAGC TCGAAAAATT GAGCTTGCCA GATCAAGCTC CAAACAAGTC 
ATGTACCAGT CCGTATCTCA AGACTCGAAA CCCTCCAAAA TGACAGAGAG GCGCGCAGCT 
CCTCTCACAG TAACCAGGAA TCAAGAAAGT TATAGTGAGA AGCGGATAAG CCGAAGCAAT 
TCCAGCTCTT CTGTAGAAGA TGCTGAGACT GCGTTATCTG CAAAACGAAG AGCGCCAGCC 
CCCATCAGTA GTCAATGTTT TGCTCCGAAA GTAGCAGAGT ACAGAAATCG GAAACGTTGT 
GCGATGCTCG GCTTCATTTT CCTTCTCGTG GTACTTCCTC TCGCAATTGG ACTTGGGGTT 
GGACTTCGTG GAAGCAATAA AAATCGCTCG ACTAACTTTC TACCAGACAC ACAACCCCCA 
GCAGGATCAA ACCCAACTCC CTCGCCTGAC ACGCAAGAAC CTACGAATTT TCTGCGTACG 
CGGGCGCCCT CGCAGTCAAC GGACGATACA CCAGGATCAC CGACCATTAA TGCTCCTACG 
CAAAGCCCAA CAGCTCCACG AATGGAAACC CCCATCGTTT TGCCAATTGA ATCTCCTTCA 
CCTTCCAATC TCAACCCGGT ATCTTCGTTG GTTCCCTCCA TCGCGCCCAC TCCAACAGTT 
TCTCTATCAA ACGCTCCTAA TATCATGGAT TCATCCCAAG CCCCAACGGT ACTGTTGCTA 
AACCAAGAGC TCTTCAGGAT GCTAAGCGAT TTGTCTGAGG ACAATGGAGC AAGCATCCTT 
CGCCCCTTCA CACCGCAGCG CCGAGCGTTC GAATGGCTTG CATCTACTTC AGACCTCGAC 
ACTTTGTCCA ACACACGAAA GGTTCAGCGA TTTTCTTTGT CTGTGTTCTT TTTTACTTCG 
AATGGTAGCC TTTGGCGTAA CAATTCTGGA TGGCTAACAG AAAGTGATGA ATGCACATGG 
TACTCGAGGT CTGGGCGCAC AACTTGCGAT GGCAGTGGAG TATACCTGCA CTTGGAATTG 
GGAGACAACG ATGTGGCAGG AAGAATTGCC ACAGAAATTG GTTTGTTGAC AGGACTTCGA 
CGTTTGGACT TGACAGGTGG TAGTGGAAGT CGCTTGAGCA GCACACTACC AACGGAGCTC 
GGAGTACTTT CCGACCTTGA GTTTGTGAGT TTCCGGAACA ATTCCATATC TAGAAGCATA 
CCGATCGAGT TGGGTCAGCT TACGAGACTC CAGCATCTTG ACTTGAGTAT GAACGTGCTT 
AGAGACTCGA TTCCGACAGC CTTTGGTCAG CTGGCAGCCT TAGAAACGCT TGATCTAGGA 
CACAATACTC TTTCCGGCTC CATCCCTACT GAGCTCGGCC GGTTGTTGAC TGCGCGAAGT 
ATCAAGCTGA ACAATAATAT TCTTACTGGT GCATTGTCCA CTTTTATTGG TCAACTTTCT 
GAATTGGAAT TGCTTAACCT TGCAACGAAC CAGGTGTCGA CCATCCCGAC CGAGCTCGGA 
CAGCTCACCA GCCTTGCATC TTTTGATTTG CATGAGAATA GGGTGAGGGG TCGTTTTCCT 
ACGGAAATTG GCTTCTTGAC CCGTCTTCAC TTTCTGGATC TCAGTAACAA TGCCTTTTCT 
GGCACTCTAC CCACGGAGAT TGGGCTATTG CAAAATACTC TTCGCCAACT GAACCTTTCG 
AATAATCGAT TTTCAGGGGA AATCCCTATT GAAATAGGAA ACCTCGTAGG GCTCTTCAGC 
CTGCAGATGC AATCGAATCG ATTCATAGGT TCCGTTCCTG AAGAATTTGA TGGACTGCTA 
TTGATTACTA CTATCCGCAT TGACAACAAT GATCTCTCTG GCATGGTGCC AGAACAAGTT 
TGTGACCACT TCTCGAATCG ATTACCAAAG TTTTACTTGG ATTGCGGAGG TAGTCCCGCC 
AAGTTGTCTT GCCCGCCAGG AACTTGTTGT ACTTACTGCT GCGAAGAAAG CACTGGATGC 
GAGTGCGTGT ACGCTGGTAC CAGCTTTCAA TTCTTGTGTT AATGCAACAA AAGTGCGAGG 
GTTGCTACCT AACGTAGCTT GAATTTTGTT TTCGCTTTCC CTATCCTTCA GGAATAAATG 
TGAAAATTTG TAAACTGAAA ATGTAAGTTT TTTTATTTCG ACGCTTCAAA GAAAACGACT 
CGAGACCTTC AAATACGCAC CAAAGGGAGA AGCAAAATAG TCTTTACAGT AATACTACTT 
TAGTTCTAGA GTAAGGGTCA GGATCGTTGG TGCGCTTGAA CCACTAATGT CTAACAAAAA 
AGCAAGCCTT GACATTAAGG TTGACTGTGA AGTGGACGAT GATGGAGCTA ATTACGAGTG 
A 

 

Protein sequence

MGQSESTITS PPKGTSSNPL EDGGASASSS SSSFTTRQPR TATNLTMSPP LSPQPRPSGG 
TNSHWETSET GASQGSDGEV VCHACGFEAS YVPEGMLHCE RCRNVSYCSL HCQQWDWTSG 
GHSDLCVDAR STAHEDSTTG SASNNNSGSG TTRPSEDSTL VSMDIANVFG PRSVGSASTP 
APAPVNRGVQ RRPETKEGGL GAYLHAHTPR TTPPTPLASR YNSPNDQDLD DDDPNEGSIV 
LVSDSESTDI LGMIQEESEG NEEPELQGSW RSRDNPFHKS ALGETSYDSE RDERELILAT 
APAATVRDAH EHAQNNNNNT VTATASFASP QRDSLKAFRA VASETTNVES HGKHSLKGFR 
HAYDDAPSKE KIAFSHTLIR HSDTADDTMS TTGSHPGQVN EATANRTNQN ATAVTNLALK 
TSINKALRDF ERLYGEEAAQ LAVLQLTQGL ITEDDVIEQA SQSPDESEQY NETTTESGDS 
SPADPKSSPT IVDQSLSSWG LSGIASTEGL DKPSAHSTSS LITENMSRDS KNAATLSSSS 
SSQQNALAFA SPHSVGATTT AASTAPLLTP AEPEDESACS DGSLCTPTES SVQAKPFTVH 
TPRYLQYRNS LSKSTAKSGL PGTTAVRVAH DSDTIKTQDT KNRANRQKEP TQNGAALVGE 
IIEGAAAVGT KRTLSPNDPP EQLREASRVV PPPAIVATPT ETSNQDFPPS IHEEKIALSM 
PRYLTYRSSL ARSVDRKSFS VQLSAQELES YEVGQLRMPG NGKHNNSDVP AVVATVQDNI 
HETERAKTAT VAAEMSSNYE LGNNEFRQSL SPSQVEVEAN KMSDSTGLAD AIGGIAALGS 
GAVALASTKK NSDNNQVISN VLLADSELGL ESQMVPIMRK LSPNAIKEGA PSRAESFYSR 
YRASLAQRLS QLFIVEDAML SGDDSDDSLN ADEERELTDQ LSSYLEKGNS KRTIEENASR 
PGALGHKSYD GMNSSWSGFD EENSVDANID GSRSSEVCER KFQTALVTDA GAINLREARE 
SARAEQARKI ELARSSSKQV MYQSVSQDSK PSKMTERRAA PLTVTRNQES YSEKRISRSN 
SSSSVEDAET ALSAKRRAPA PISSQCFAPK VAEYRNRKRC AMLGFIFLLV VLPLAIGLGV 
GLRGSNKNRS TNFLPDTQPP AGSNPTPSPD TQEPTNFLRT RAPSQSTDDT PGSPTINAPT 
QSPTAPRMET PIVLPIESPS PSNLNPVSSL VPSIAPTPTV SLSNAPNIMD SSQAPTVLLL 
NQELFRMLSD LSEDNGASIL RPFTPQRRAF EWLASTSDLD TLSNTRKVQR FSLSVFFFTS 
NGSLWRNNSG WLTESDECTW YSRSGRTTCD GSGVYLHLEL GDNDVAGRIA TEIGLLTGLR 
RLDLTGGSGS RLSSTLPTEL GVLSDLEFNK FVTTSRIDYQ SFTWIAEVVP PSCLARQELV 
VLTAAKKALD ARINVKICKL KIVRVRIVGA LEPLMSNKKA SLDIKVDCEV DDDGANYE